Penta-nucleotide Imperfect Repeats of Coffea arabica chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008535 | TTTCT | 3 | 121 | 135 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | Non-Coding |
2 | NC_008535 | TAAAA | 4 | 4160 | 4180 | 21 | 80 % | 20 % | 0 % | 0 % | 9 % | Non-Coding |
3 | NC_008535 | TCTTT | 3 | 5402 | 5415 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 116617090 |
4 | NC_008535 | GATAA | 3 | 8216 | 8230 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
5 | NC_008535 | TTTCC | 3 | 13110 | 13123 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 116617094 |
6 | NC_008535 | ATTCA | 3 | 14217 | 14230 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
7 | NC_008535 | ACAAA | 4 | 30378 | 30397 | 20 | 80 % | 0 % | 0 % | 20 % | 10 % | Non-Coding |
8 | NC_008535 | TTATT | 3 | 32879 | 32892 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_008535 | ATTTT | 3 | 49912 | 49925 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
10 | NC_008535 | TTGAT | 3 | 53302 | 53315 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | Non-Coding |
11 | NC_008535 | TAGAA | 3 | 68505 | 68520 | 16 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
12 | NC_008535 | GATAA | 3 | 71743 | 71756 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 116617154 |
13 | NC_008535 | ACTTA | 3 | 77880 | 77893 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 116617154 |
14 | NC_008535 | TCCGG | 3 | 95436 | 95450 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 116617154 |
15 | NC_008535 | TAAAA | 3 | 118136 | 118150 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 116617167 |
16 | NC_008535 | ACCGG | 3 | 144904 | 144918 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |