Di-nucleotide Imperfect Repeats of Coffea arabica chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008535 | AT | 6 | 9186 | 9196 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
2 | NC_008535 | AT | 7 | 20250 | 20262 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 116617098 |
3 | NC_008535 | TA | 7 | 31514 | 31527 | 14 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
4 | NC_008535 | TA | 6 | 32032 | 32044 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_008535 | AG | 6 | 36090 | 36100 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
6 | NC_008535 | TC | 6 | 36683 | 36693 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 116617105 |
7 | NC_008535 | AT | 6 | 36974 | 36984 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
8 | NC_008535 | TG | 6 | 41227 | 41237 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 116617108 |
9 | NC_008535 | TA | 6 | 42828 | 42841 | 14 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
10 | NC_008535 | AT | 6 | 43891 | 43901 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 116617109 |
11 | NC_008535 | TA | 6 | 47264 | 47274 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_008535 | AT | 6 | 47450 | 47461 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
13 | NC_008535 | AT | 6 | 63376 | 63386 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 116617121 |
14 | NC_008535 | TA | 6 | 67940 | 67950 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
15 | NC_008535 | TA | 6 | 69684 | 69695 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 116617131 |
16 | NC_008535 | AT | 6 | 73153 | 73163 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 116617154 |
17 | NC_008535 | TA | 6 | 76503 | 76514 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 116617154 |
18 | NC_008535 | TA | 6 | 77435 | 77445 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 116617154 |
19 | NC_008535 | AT | 6 | 77485 | 77495 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 116617154 |
20 | NC_008535 | CT | 6 | 87836 | 87846 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 116617154 |
21 | NC_008535 | TA | 7 | 119808 | 119820 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 116617167 |
22 | NC_008535 | TA | 6 | 124461 | 124471 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 116617167 |
23 | NC_008535 | AT | 6 | 124790 | 124801 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 116617167 |
24 | NC_008535 | AG | 6 | 152509 | 152519 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 116617170 |