Tetra-nucleotide Imperfect Repeats of Piper cenocladum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008457 | TTTG | 3 | 2221 | 2232 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 115605003 |
| 2 | NC_008457 | ATAA | 3 | 2578 | 2589 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 115605003 |
| 3 | NC_008457 | AATT | 3 | 5718 | 5729 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 115605004 |
| 4 | NC_008457 | TAGA | 3 | 8793 | 8804 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_008457 | GTTT | 3 | 10552 | 10563 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 115605007 |
| 6 | NC_008457 | TCAA | 3 | 16240 | 16251 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_008457 | TCAA | 3 | 17465 | 17476 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 115605012 |
| 8 | NC_008457 | TTGT | 3 | 18839 | 18850 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 115605012 |
| 9 | NC_008457 | GAAA | 3 | 27006 | 27018 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 115605014 |
| 10 | NC_008457 | ACAT | 3 | 28197 | 28208 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_008457 | CTGT | 3 | 28738 | 28749 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | Non-Coding |
| 12 | NC_008457 | TTTA | 3 | 29831 | 29841 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 13 | NC_008457 | TCTT | 3 | 30798 | 30809 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_008457 | AGAT | 3 | 31135 | 31146 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 15 | NC_008457 | AATT | 5 | 31154 | 31173 | 20 | 50 % | 50 % | 0 % | 0 % | 10 % | Non-Coding |
| 16 | NC_008457 | TTCC | 3 | 33630 | 33641 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 17 | NC_008457 | AACA | 3 | 33899 | 33909 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_008457 | GGTT | 3 | 34582 | 34594 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 115605017 |
| 19 | NC_008457 | GAAA | 3 | 35950 | 35961 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115605018 |
| 20 | NC_008457 | GAAT | 3 | 40034 | 40044 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115605021 |
| 21 | NC_008457 | AATG | 3 | 41882 | 41893 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 115605022 |
| 22 | NC_008457 | TTAA | 3 | 43668 | 43678 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 23 | NC_008457 | TTTC | 3 | 44519 | 44529 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115605023 |
| 24 | NC_008457 | AGAA | 3 | 48528 | 48539 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 25 | NC_008457 | TTGA | 3 | 49003 | 49015 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 26 | NC_008457 | ATTA | 3 | 53028 | 53039 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_008457 | TTGG | 3 | 53464 | 53475 | 12 | 0 % | 50 % | 50 % | 0 % | 0 % | Non-Coding |
| 28 | NC_008457 | ATTT | 3 | 53998 | 54008 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_008457 | TTTC | 3 | 54751 | 54762 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 30 | NC_008457 | ATTC | 3 | 57150 | 57160 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 31 | NC_008457 | TATT | 3 | 57317 | 57328 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_008457 | GGAC | 3 | 57818 | 57829 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 115605030 |
| 33 | NC_008457 | GGTA | 3 | 58599 | 58609 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 115605030 |
| 34 | NC_008457 | GAAA | 3 | 61610 | 61621 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_008457 | CAAA | 3 | 62118 | 62129 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 115605032 |
| 36 | NC_008457 | ATTT | 4 | 62163 | 62178 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 37 | NC_008457 | ATCC | 3 | 62978 | 62990 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 115605033 |
| 38 | NC_008457 | AATG | 3 | 64867 | 64878 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 115605034 |
| 39 | NC_008457 | TCTT | 3 | 66692 | 66702 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 40 | NC_008457 | ATAG | 3 | 68015 | 68025 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 41 | NC_008457 | ATGA | 3 | 68032 | 68043 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_008457 | AAAT | 3 | 68263 | 68274 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_008457 | AAAT | 3 | 68285 | 68296 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_008457 | TTCT | 3 | 68531 | 68541 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 45 | NC_008457 | TGAA | 3 | 68876 | 68887 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 46 | NC_008457 | CAAA | 3 | 68897 | 68908 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 47 | NC_008457 | ATAA | 4 | 70897 | 70912 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 48 | NC_008457 | TTAA | 3 | 71941 | 71951 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 49 | NC_008457 | TTCT | 3 | 74809 | 74820 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115605088 |
| 50 | NC_008457 | AATA | 4 | 75435 | 75449 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 115605088 |
| 51 | NC_008457 | TTAG | 3 | 77903 | 77914 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 115605088 |
| 52 | NC_008457 | TTTC | 3 | 78277 | 78287 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115605088 |
| 53 | NC_008457 | GAAA | 4 | 84405 | 84419 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 115605088 |
| 54 | NC_008457 | CAAT | 3 | 86219 | 86229 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 115605088 |
| 55 | NC_008457 | TTCT | 3 | 91385 | 91395 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115605088 |
| 56 | NC_008457 | CTTT | 3 | 92575 | 92585 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115605088 |
| 57 | NC_008457 | AATA | 3 | 95334 | 95346 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 115605088 |
| 58 | NC_008457 | TTTC | 3 | 95396 | 95407 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115605088 |
| 59 | NC_008457 | TCTA | 3 | 97420 | 97430 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 115605088 |
| 60 | NC_008457 | GATA | 3 | 98150 | 98162 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 115605088 |
| 61 | NC_008457 | ATCC | 3 | 106718 | 106729 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 115605086 |
| 62 | NC_008457 | TCTA | 3 | 107111 | 107122 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 115605086 |
| 63 | NC_008457 | AAGG | 3 | 107249 | 107259 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 115605086 |
| 64 | NC_008457 | GAGG | 3 | 109979 | 109990 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 115605086 |
| 65 | NC_008457 | AGGT | 3 | 110196 | 110207 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 115605086 |
| 66 | NC_008457 | TAAG | 3 | 111318 | 111328 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115605086 |
| 67 | NC_008457 | GAAA | 3 | 115680 | 115690 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115605086 |
| 68 | NC_008457 | TAAG | 3 | 116189 | 116199 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115605086 |
| 69 | NC_008457 | ACAA | 3 | 117113 | 117123 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 115605086 |
| 70 | NC_008457 | GAAA | 3 | 119103 | 119113 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115605086 |
| 71 | NC_008457 | GAAT | 3 | 119498 | 119508 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115605086 |
| 72 | NC_008457 | TTAT | 3 | 121340 | 121351 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 115605086 |
| 73 | NC_008457 | GAAA | 3 | 124966 | 124977 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115605086 |
| 74 | NC_008457 | TGTT | 3 | 125768 | 125778 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 115605086 |
| 75 | NC_008457 | ATAA | 4 | 127164 | 127180 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | 115605086 |
| 76 | NC_008457 | CTTT | 3 | 127829 | 127840 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115605086 |
| 77 | NC_008457 | TGAA | 3 | 128726 | 128737 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 115605086 |
| 78 | NC_008457 | AGAA | 3 | 129487 | 129498 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115605086 |
| 79 | NC_008457 | TTAA | 3 | 130525 | 130535 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 115605086 |
| 80 | NC_008457 | TTTC | 3 | 132279 | 132290 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115605086 |
| 81 | NC_008457 | CTTA | 3 | 136965 | 136975 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 115605086 |
| 82 | NC_008457 | CCTT | 3 | 141034 | 141044 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 115605086 |
| 83 | NC_008457 | GGAT | 3 | 141564 | 141575 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 115605086 |
| 84 | NC_008457 | TGAA | 3 | 152885 | 152896 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 115605084 |
| 85 | NC_008457 | TGAT | 3 | 153955 | 153967 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 115605084 |
| 86 | NC_008457 | AAAG | 3 | 155708 | 155718 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115605084 |
| 87 | NC_008457 | ATTT | 3 | 156771 | 156782 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 115605084 |