Tetra-nucleotide Imperfect Repeats of Pelargonium x hortorum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008454 | ATTC | 3 | 40 | 51 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 2 | NC_008454 | TGGG | 3 | 3729 | 3741 | 13 | 0 % | 25 % | 75 % | 0 % | 7 % | 115531895 |
| 3 | NC_008454 | TCGA | 3 | 4159 | 4170 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 115531895 |
| 4 | NC_008454 | GAAA | 3 | 4453 | 4463 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 5 | NC_008454 | CAAA | 3 | 4973 | 4984 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_008454 | TTCA | 3 | 6589 | 6601 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 7 | NC_008454 | TTTC | 3 | 6811 | 6821 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115531897 |
| 8 | NC_008454 | AGGG | 3 | 7362 | 7372 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 9 | NC_008454 | TATG | 3 | 8150 | 8162 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 10 | NC_008454 | AAAG | 3 | 8692 | 8703 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_008454 | AAGA | 3 | 9495 | 9505 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 12 | NC_008454 | TTTC | 3 | 11973 | 11984 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115531900 |
| 13 | NC_008454 | TTAT | 3 | 12154 | 12165 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 115531900 |
| 14 | NC_008454 | GTAA | 3 | 12178 | 12188 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115531900 |
| 15 | NC_008454 | GGAA | 3 | 12882 | 12893 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 16 | NC_008454 | AAAT | 3 | 13350 | 13361 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_008454 | ACTT | 3 | 15052 | 15063 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 18 | NC_008454 | TCTT | 4 | 15898 | 15913 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 19 | NC_008454 | AAAG | 3 | 15919 | 15930 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_008454 | TGAA | 3 | 16982 | 16992 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115531904 |
| 21 | NC_008454 | ATAA | 3 | 20975 | 20986 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 115531905 |
| 22 | NC_008454 | ATTC | 3 | 22319 | 22330 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 115531905 |
| 23 | NC_008454 | GAAT | 3 | 22388 | 22398 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115531905 |
| 24 | NC_008454 | CATT | 3 | 26564 | 26575 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 115531906 |
| 25 | NC_008454 | TCTT | 3 | 28393 | 28403 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 26 | NC_008454 | CTAT | 3 | 30812 | 30822 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_008454 | AAGA | 3 | 33289 | 33299 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115531909 |
| 28 | NC_008454 | CTTA | 4 | 34008 | 34022 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | 115531909 |
| 29 | NC_008454 | TTCT | 3 | 34894 | 34904 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_008454 | TAAA | 3 | 35232 | 35243 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_008454 | TGAA | 3 | 41082 | 41092 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_008454 | TCTT | 3 | 44010 | 44021 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 33 | NC_008454 | CTAT | 3 | 44340 | 44350 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 34 | NC_008454 | ATTT | 3 | 45082 | 45093 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_008454 | GAAA | 3 | 45308 | 45319 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_008454 | GAAA | 3 | 47058 | 47069 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115531915 |
| 37 | NC_008454 | TTGC | 3 | 47459 | 47469 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 115531915 |
| 38 | NC_008454 | ATTC | 3 | 49445 | 49456 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 39 | NC_008454 | TTAG | 3 | 50630 | 50640 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 115531917 |
| 40 | NC_008454 | AATA | 3 | 51374 | 51384 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_008454 | AAGG | 3 | 51869 | 51881 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | Non-Coding |
| 42 | NC_008454 | GATT | 3 | 55580 | 55591 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_008454 | TGCA | 3 | 60742 | 60754 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 115531923 |
| 44 | NC_008454 | CTTT | 4 | 63510 | 63524 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 45 | NC_008454 | CTTT | 3 | 65315 | 65325 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_008454 | TTCA | 3 | 65741 | 65751 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 47 | NC_008454 | TAGA | 3 | 70066 | 70077 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_008454 | AAAG | 3 | 77725 | 77735 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115531936 |
| 49 | NC_008454 | CTTA | 3 | 80271 | 80281 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 50 | NC_008454 | CCTT | 3 | 84466 | 84476 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 51 | NC_008454 | GGAT | 3 | 85007 | 85018 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 52 | NC_008454 | AAGA | 3 | 90133 | 90144 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115531939 |
| 53 | NC_008454 | AAAG | 3 | 95221 | 95231 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115531939 |
| 54 | NC_008454 | CATT | 3 | 96625 | 96637 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 115531939 |
| 55 | NC_008454 | TCTT | 3 | 97019 | 97030 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115531939 |
| 56 | NC_008454 | AAAC | 7 | 97616 | 97643 | 28 | 75 % | 0 % | 0 % | 25 % | 10 % | 115531939 |
| 57 | NC_008454 | AATA | 3 | 98839 | 98849 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 115531939 |
| 58 | NC_008454 | TAGA | 3 | 104679 | 104690 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 115531939 |
| 59 | NC_008454 | AAGC | 3 | 105545 | 105555 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 115531939 |
| 60 | NC_008454 | CAAT | 3 | 107884 | 107894 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 115531939 |
| 61 | NC_008454 | TTGA | 3 | 117445 | 117456 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 115531939 |
| 62 | NC_008454 | GAAA | 3 | 122254 | 122265 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115531939 |
| 63 | NC_008454 | TATT | 4 | 124932 | 124947 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 115532023 |
| 64 | NC_008454 | ATAG | 3 | 125610 | 125620 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115532023 |
| 65 | NC_008454 | TCTT | 3 | 128218 | 128230 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 115532023 |
| 66 | NC_008454 | AAAG | 4 | 128780 | 128794 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 115532023 |
| 67 | NC_008454 | TTCA | 3 | 128865 | 128875 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 115532023 |
| 68 | NC_008454 | AAAG | 3 | 128953 | 128963 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115532023 |
| 69 | NC_008454 | TACA | 3 | 129711 | 129721 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 115532023 |
| 70 | NC_008454 | AAAG | 3 | 132176 | 132187 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 115532023 |
| 71 | NC_008454 | GTCT | 3 | 132971 | 132981 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 115532023 |
| 72 | NC_008454 | AAAG | 3 | 135469 | 135479 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115532023 |
| 73 | NC_008454 | ATTT | 3 | 135706 | 135718 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 115532023 |
| 74 | NC_008454 | AAGA | 3 | 137429 | 137440 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115532023 |
| 75 | NC_008454 | ATGA | 3 | 138948 | 138959 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 115532023 |
| 76 | NC_008454 | TTAA | 3 | 139109 | 139120 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 115532023 |
| 77 | NC_008454 | AGAC | 3 | 144672 | 144682 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 115532023 |
| 78 | NC_008454 | ATTT | 3 | 145179 | 145190 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 115532023 |
| 79 | NC_008454 | TCTT | 3 | 145465 | 145476 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 115532023 |
| 80 | NC_008454 | TCTT | 3 | 145616 | 145626 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115532023 |
| 81 | NC_008454 | CATT | 3 | 148148 | 148159 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 115532023 |
| 82 | NC_008454 | CTTT | 3 | 148690 | 148700 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115532023 |
| 83 | NC_008454 | AAGA | 3 | 149423 | 149435 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 115532023 |
| 84 | NC_008454 | TAAA | 3 | 152708 | 152719 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 115532023 |
| 85 | NC_008454 | TTTC | 3 | 155388 | 155399 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115532024 |
| 86 | NC_008454 | CTAG | 3 | 157174 | 157185 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 115532024 |
| 87 | NC_008454 | TCTT | 3 | 157639 | 157650 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 115532024 |
| 88 | NC_008454 | ATGA | 3 | 157653 | 157663 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 115532024 |
| 89 | NC_008454 | AAAG | 3 | 161047 | 161057 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115532024 |
| 90 | NC_008454 | GAAA | 3 | 165764 | 165775 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115532024 |
| 91 | NC_008454 | CTTT | 3 | 167936 | 167946 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115532024 |
| 92 | NC_008454 | AGAA | 3 | 168699 | 168710 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115532024 |
| 93 | NC_008454 | ATTG | 3 | 169759 | 169769 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 115532024 |
| 94 | NC_008454 | GCTT | 3 | 172098 | 172108 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 115532024 |
| 95 | NC_008454 | GTAT | 3 | 173296 | 173306 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 115532024 |
| 96 | NC_008454 | AGAA | 3 | 175136 | 175146 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 115532024 |
| 97 | NC_008454 | CTAT | 3 | 178999 | 179011 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 115532024 |
| 98 | NC_008454 | GTTT | 7 | 180010 | 180037 | 28 | 0 % | 75 % | 25 % | 0 % | 10 % | 115532024 |
| 99 | NC_008454 | AAAG | 3 | 180622 | 180633 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 115532024 |
| 100 | NC_008454 | TTTC | 3 | 187507 | 187518 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 115532024 |
| 101 | NC_008454 | ATCC | 3 | 192635 | 192646 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 102 | NC_008454 | AAGG | 3 | 193177 | 193187 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 103 | NC_008454 | GAGG | 3 | 196015 | 196026 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 104 | NC_008454 | AGGT | 3 | 196256 | 196267 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 105 | NC_008454 | TAAG | 3 | 197372 | 197382 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 106 | NC_008454 | AAAG | 3 | 197756 | 197767 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 107 | NC_008454 | GTAT | 3 | 198602 | 198612 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 108 | NC_008454 | TATT | 3 | 199422 | 199433 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 115532008 |
| 109 | NC_008454 | CTTT | 3 | 199918 | 199928 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 115532008 |
| 110 | NC_008454 | TCTA | 3 | 207576 | 207587 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 111 | NC_008454 | TTCT | 3 | 208376 | 208386 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 112 | NC_008454 | TGAA | 3 | 211902 | 211912 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 113 | NC_008454 | AAAG | 4 | 214129 | 214143 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |