Tetra-nucleotide Imperfect Repeats of Morus indica chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008359 | AAAG | 3 | 183 | 194 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 2 | NC_008359 | AAGT | 3 | 1032 | 1042 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 114804245 |
| 3 | NC_008359 | ATTT | 3 | 1602 | 1613 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_008359 | AAAT | 3 | 3418 | 3429 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114804246 |
| 5 | NC_008359 | ATTC | 3 | 4695 | 4706 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_008359 | AATT | 3 | 6220 | 6231 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 114804247 |
| 7 | NC_008359 | ACAT | 3 | 6663 | 6674 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 8 | NC_008359 | AAAT | 3 | 6701 | 6712 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_008359 | TTTA | 4 | 9296 | 9310 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 10 | NC_008359 | TATT | 3 | 9492 | 9503 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_008359 | TTTC | 3 | 13188 | 13199 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 114804251 |
| 12 | NC_008359 | ATTT | 4 | 13957 | 13972 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 13 | NC_008359 | AAAT | 3 | 14546 | 14557 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_008359 | TGTT | 3 | 17001 | 17011 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 114804254 |
| 15 | NC_008359 | GTTA | 3 | 17543 | 17553 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 16 | NC_008359 | GAAT | 3 | 23880 | 23890 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 114804256 |
| 17 | NC_008359 | TATT | 3 | 24175 | 24186 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 114804256 |
| 18 | NC_008359 | TCAT | 3 | 28094 | 28104 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_008359 | TGAA | 3 | 29992 | 30003 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_008359 | TATT | 3 | 32188 | 32199 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_008359 | GAAA | 3 | 32539 | 32549 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_008359 | TCTT | 3 | 32984 | 32995 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 23 | NC_008359 | TTTC | 3 | 33082 | 33093 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_008359 | CAAT | 3 | 33929 | 33941 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 25 | NC_008359 | GAAA | 3 | 36155 | 36166 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 114804261 |
| 26 | NC_008359 | AATG | 3 | 42169 | 42180 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 114804265 |
| 27 | NC_008359 | TAAA | 3 | 46432 | 46444 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 114804266 |
| 28 | NC_008359 | CTAT | 3 | 47592 | 47603 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 29 | NC_008359 | GATC | 3 | 48591 | 48601 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 30 | NC_008359 | TAAA | 3 | 48657 | 48667 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_008359 | AAAG | 4 | 50074 | 50088 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 32 | NC_008359 | TTGA | 3 | 50727 | 50737 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_008359 | TTAT | 3 | 51021 | 51033 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 34 | NC_008359 | TTTA | 3 | 51269 | 51280 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_008359 | GTCT | 3 | 52645 | 52656 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 114804269 |
| 36 | NC_008359 | GTTT | 3 | 53401 | 53413 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 37 | NC_008359 | TTAA | 3 | 56829 | 56841 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 38 | NC_008359 | TGCA | 3 | 58355 | 58367 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 114804273 |
| 39 | NC_008359 | GTTA | 3 | 59520 | 59530 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 40 | NC_008359 | TAAA | 3 | 59715 | 59726 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114804274 |
| 41 | NC_008359 | ATTT | 3 | 61732 | 61743 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 42 | NC_008359 | GATC | 3 | 64820 | 64831 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 43 | NC_008359 | AAAG | 3 | 67966 | 67977 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 44 | NC_008359 | TTTA | 3 | 68356 | 68366 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 45 | NC_008359 | ATTC | 3 | 68408 | 68418 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_008359 | TCTT | 3 | 69646 | 69657 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 47 | NC_008359 | ATTG | 3 | 70470 | 70481 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_008359 | TGAA | 3 | 71943 | 71954 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 49 | NC_008359 | TTTC | 3 | 73866 | 73876 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114804288 |
| 50 | NC_008359 | AAAT | 3 | 74432 | 74443 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114804288 |
| 51 | NC_008359 | TTTC | 3 | 81345 | 81355 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114804288 |
| 52 | NC_008359 | AAAG | 3 | 85774 | 85785 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 114804288 |
| 53 | NC_008359 | TTTA | 3 | 87064 | 87074 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 114804288 |
| 54 | NC_008359 | TTCT | 3 | 91073 | 91083 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114804288 |
| 55 | NC_008359 | CTTT | 3 | 92266 | 92276 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114804288 |
| 56 | NC_008359 | TGAT | 3 | 94100 | 94112 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 114804288 |
| 57 | NC_008359 | AATA | 3 | 94974 | 94986 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 114804288 |
| 58 | NC_008359 | TTAT | 3 | 101758 | 101769 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 114804287 |
| 59 | NC_008359 | TTTC | 3 | 101810 | 101821 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 114804287 |
| 60 | NC_008359 | ATCC | 3 | 105605 | 105616 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 114804287 |
| 61 | NC_008359 | TCTA | 3 | 105996 | 106007 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 114804287 |
| 62 | NC_008359 | AAGG | 3 | 106135 | 106145 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 114804287 |
| 63 | NC_008359 | GAGG | 3 | 108857 | 108868 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 114804287 |
| 64 | NC_008359 | AGGT | 3 | 109070 | 109081 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 114804287 |
| 65 | NC_008359 | TAAG | 3 | 110190 | 110200 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 114804287 |
| 66 | NC_008359 | TCTT | 3 | 111198 | 111209 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 114804287 |
| 67 | NC_008359 | TAAA | 3 | 113067 | 113078 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114804287 |
| 68 | NC_008359 | ATAG | 3 | 115125 | 115136 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 114804287 |
| 69 | NC_008359 | CAAA | 3 | 115412 | 115423 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 114804287 |
| 70 | NC_008359 | ATTA | 3 | 116066 | 116077 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 114804287 |
| 71 | NC_008359 | ATTT | 3 | 116832 | 116843 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 114804287 |
| 72 | NC_008359 | ATGA | 3 | 121760 | 121771 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 114804287 |
| 73 | NC_008359 | AATA | 3 | 122339 | 122350 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114804287 |
| 74 | NC_008359 | ATTT | 5 | 123415 | 123433 | 19 | 25 % | 75 % | 0 % | 0 % | 10 % | 114804287 |
| 75 | NC_008359 | TGGG | 3 | 127370 | 127380 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 114804287 |
| 76 | NC_008359 | ATTT | 3 | 128905 | 128916 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 114804287 |
| 77 | NC_008359 | AAAT | 3 | 130192 | 130204 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 114804287 |
| 78 | NC_008359 | CTTA | 3 | 135671 | 135681 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 114804287 |
| 79 | NC_008359 | GGAT | 3 | 140255 | 140266 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 114804287 |
| 80 | NC_008359 | AAGA | 3 | 144048 | 144059 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 114804287 |
| 81 | NC_008359 | ATCA | 3 | 151759 | 151771 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 114804324 |
| 82 | NC_008359 | CTTT | 3 | 151780 | 151790 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114804324 |
| 83 | NC_008359 | AAAG | 3 | 153595 | 153605 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 114804324 |