Penta-nucleotide Imperfect Repeats of Nandina domestica chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008336 | GAAAA | 3 | 25898 | 25912 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 114329960 |
2 | NC_008336 | AGTAA | 3 | 28725 | 28740 | 16 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
3 | NC_008336 | TTTCT | 3 | 42855 | 42868 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
4 | NC_008336 | AAATA | 4 | 52016 | 52034 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
5 | NC_008336 | TAAGT | 3 | 53560 | 53574 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
6 | NC_008336 | TTGAA | 3 | 54304 | 54317 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | Non-Coding |
7 | NC_008336 | TTTCA | 3 | 72877 | 72891 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 114329992 |
8 | NC_008336 | TCCTT | 3 | 81621 | 81636 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | 114329992 |
9 | NC_008336 | ATATG | 3 | 87449 | 87463 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 114329992 |
10 | NC_008336 | TCCGG | 3 | 96050 | 96064 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 114329992 |
11 | NC_008336 | TTTCG | 3 | 98644 | 98657 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 114329992 |
12 | NC_008336 | ATTTC | 3 | 129790 | 129803 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 114329993 |
13 | NC_008336 | CGAAA | 3 | 143416 | 143429 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | Non-Coding |
14 | NC_008336 | ACCGG | 3 | 146008 | 146022 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
15 | NC_008336 | CATAC | 3 | 147298 | 147311 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |