Penta-nucleotide Imperfect Repeats of Platanus occidentalis chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008335 | TGAAA | 3 | 2131 | 2144 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
2 | NC_008335 | GGATG | 3 | 3261 | 3274 | 14 | 20 % | 20 % | 60 % | 0 % | 7 % | 114329727 |
3 | NC_008335 | TCTCT | 3 | 5767 | 5780 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 114329728 |
4 | NC_008335 | AGTGT | 3 | 30396 | 30411 | 16 | 20 % | 40 % | 40 % | 0 % | 6 % | Non-Coding |
5 | NC_008335 | ATAGA | 4 | 34493 | 34511 | 19 | 60 % | 20 % | 20 % | 0 % | 5 % | Non-Coding |
6 | NC_008335 | ATTAG | 3 | 35088 | 35103 | 16 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
7 | NC_008335 | AAAAT | 3 | 36466 | 36480 | 15 | 80 % | 20 % | 0 % | 0 % | 0 % | Non-Coding |
8 | NC_008335 | TATAA | 3 | 36523 | 36536 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_008335 | TATTT | 3 | 39898 | 39912 | 15 | 20 % | 80 % | 0 % | 0 % | 0 % | Non-Coding |
10 | NC_008335 | GTAAT | 3 | 40835 | 40848 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | Non-Coding |
11 | NC_008335 | TTCCT | 3 | 46221 | 46234 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
12 | NC_008335 | AATTA | 3 | 58189 | 58204 | 16 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |
13 | NC_008335 | TAATA | 4 | 63715 | 63733 | 19 | 60 % | 40 % | 0 % | 0 % | 5 % | Non-Coding |
14 | NC_008335 | TGAAA | 3 | 67546 | 67560 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
15 | NC_008335 | AAAAG | 3 | 70756 | 70770 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
16 | NC_008335 | TTATT | 4 | 78526 | 78546 | 21 | 20 % | 80 % | 0 % | 0 % | 9 % | 114329770 |
17 | NC_008335 | ATTTT | 3 | 90618 | 90632 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 114329770 |
18 | NC_008335 | TCCGG | 3 | 102164 | 102178 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 114329770 |
19 | NC_008335 | TTTCG | 3 | 104767 | 104780 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 114329770 |
20 | NC_008335 | TAAAA | 3 | 128255 | 128269 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 114329771 |
21 | NC_008335 | ATTTT | 3 | 132309 | 132323 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 114329771 |
22 | NC_008335 | TCTTT | 3 | 134077 | 134091 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 114329771 |
23 | NC_008335 | ACCGG | 3 | 151763 | 151777 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
24 | NC_008335 | AAAAG | 3 | 161731 | 161745 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |