Tetra-nucleotide Imperfect Repeats of Platanus occidentalis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008335 | CATT | 3 | 148 | 158 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_008335 | TTTC | 3 | 173 | 184 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 3 | NC_008335 | AAGT | 3 | 1311 | 1321 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 114329726 |
| 4 | NC_008335 | CATT | 3 | 2841 | 2852 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 114329727 |
| 5 | NC_008335 | AAAT | 3 | 3526 | 3537 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114329727 |
| 6 | NC_008335 | AAAT | 3 | 4528 | 4539 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 7 | NC_008335 | TCTT | 3 | 4671 | 4681 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_008335 | TTGT | 4 | 5200 | 5215 | 16 | 0 % | 75 % | 25 % | 0 % | 6 % | Non-Coding |
| 9 | NC_008335 | TCTT | 3 | 6609 | 6620 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 114329728 |
| 10 | NC_008335 | TAGA | 3 | 9540 | 9551 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_008335 | GATA | 3 | 9566 | 9577 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_008335 | CCTT | 3 | 10014 | 10024 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 13 | NC_008335 | AATA | 4 | 10057 | 10072 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 14 | NC_008335 | ATCT | 3 | 11270 | 11281 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_008335 | TACA | 3 | 11480 | 11492 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 16 | NC_008335 | AAAT | 3 | 15519 | 15530 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_008335 | ATTA | 4 | 16205 | 16220 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 18 | NC_008335 | GAAT | 3 | 24771 | 24781 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 114329737 |
| 19 | NC_008335 | TCAT | 3 | 28921 | 28931 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_008335 | GAAT | 3 | 31977 | 31988 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_008335 | ATTC | 3 | 34453 | 34463 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_008335 | TCTA | 3 | 34538 | 34549 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 23 | NC_008335 | TTCA | 3 | 35636 | 35646 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_008335 | ATTT | 3 | 35864 | 35875 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_008335 | AGAA | 3 | 36040 | 36051 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_008335 | GAAA | 3 | 38592 | 38603 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 114329742 |
| 27 | NC_008335 | GCTT | 3 | 38995 | 39005 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 114329742 |
| 28 | NC_008335 | ATCT | 4 | 39995 | 40010 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 29 | NC_008335 | AATG | 3 | 44517 | 44528 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 114329746 |
| 30 | NC_008335 | TCTT | 5 | 47634 | 47653 | 20 | 0 % | 75 % | 0 % | 25 % | 5 % | 114329747 |
| 31 | NC_008335 | ATAA | 4 | 48604 | 48618 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 114329747 |
| 32 | NC_008335 | ATTT | 3 | 49861 | 49871 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 33 | NC_008335 | TTTA | 3 | 51361 | 51373 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 34 | NC_008335 | CAAT | 3 | 51466 | 51476 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 35 | NC_008335 | TTAT | 4 | 51953 | 51967 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 36 | NC_008335 | CTTT | 3 | 53960 | 53972 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 37 | NC_008335 | TTCT | 3 | 56350 | 56361 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_008335 | TTTA | 3 | 66531 | 66542 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 114329756 |
| 39 | NC_008335 | TTTC | 3 | 72271 | 72282 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 40 | NC_008335 | CGTT | 3 | 72913 | 72923 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | Non-Coding |
| 41 | NC_008335 | ATGC | 3 | 73996 | 74006 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 42 | NC_008335 | AAAT | 3 | 75530 | 75541 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_008335 | TTTC | 3 | 76795 | 76805 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 44 | NC_008335 | TTTA | 3 | 78228 | 78239 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 114329770 |
| 45 | NC_008335 | AAAG | 3 | 78364 | 78374 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 114329770 |
| 46 | NC_008335 | TTTC | 3 | 82881 | 82891 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114329770 |
| 47 | NC_008335 | GTAT | 4 | 85499 | 85514 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | 114329770 |
| 48 | NC_008335 | TTAT | 3 | 85634 | 85645 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 114329770 |
| 49 | NC_008335 | TAAT | 3 | 88429 | 88440 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 114329770 |
| 50 | NC_008335 | GAAA | 3 | 89012 | 89023 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 114329770 |
| 51 | NC_008335 | CAAT | 3 | 90799 | 90809 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 114329770 |
| 52 | NC_008335 | TTCT | 3 | 95857 | 95867 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114329770 |
| 53 | NC_008335 | CTTT | 3 | 97044 | 97054 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114329770 |
| 54 | NC_008335 | TGAT | 3 | 98884 | 98896 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 114329770 |
| 55 | NC_008335 | AATA | 3 | 99767 | 99779 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 114329770 |
| 56 | NC_008335 | TTCT | 3 | 100865 | 100875 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 114329770 |
| 57 | NC_008335 | ATCC | 3 | 110387 | 110398 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 114329771 |
| 58 | NC_008335 | TCTA | 3 | 110775 | 110786 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 114329771 |
| 59 | NC_008335 | AAGG | 3 | 110914 | 110924 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 114329771 |
| 60 | NC_008335 | GAGG | 3 | 113628 | 113639 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 114329771 |
| 61 | NC_008335 | AGGT | 3 | 113840 | 113851 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 114329771 |
| 62 | NC_008335 | TAAG | 3 | 114960 | 114970 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 114329771 |
| 63 | NC_008335 | GGAA | 3 | 117021 | 117031 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 114329771 |
| 64 | NC_008335 | AATT | 3 | 117618 | 117629 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 114329771 |
| 65 | NC_008335 | AAAT | 3 | 120378 | 120389 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 114329771 |
| 66 | NC_008335 | ACAA | 3 | 120762 | 120773 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 114329771 |
| 67 | NC_008335 | TAGA | 3 | 122926 | 122937 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 114329771 |
| 68 | NC_008335 | GAAA | 3 | 124377 | 124388 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 114329771 |
| 69 | NC_008335 | AATC | 3 | 128565 | 128576 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 114329771 |
| 70 | NC_008335 | TAAT | 3 | 133031 | 133042 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 114329771 |
| 71 | NC_008335 | TTCC | 3 | 136911 | 136921 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 114329771 |
| 72 | NC_008335 | CTTA | 3 | 138972 | 138982 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 114329771 |
| 73 | NC_008335 | CCTT | 3 | 143018 | 143028 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 114329771 |
| 74 | NC_008335 | GGAT | 3 | 143544 | 143555 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 114329771 |
| 75 | NC_008335 | AGAA | 3 | 153067 | 153077 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 114329808 |
| 76 | NC_008335 | ATCA | 3 | 155046 | 155058 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 114329808 |
| 77 | NC_008335 | TGAT | 3 | 155141 | 155153 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 114329808 |
| 78 | NC_008335 | AAAG | 3 | 156888 | 156898 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 114329808 |
| 79 | NC_008335 | ATTT | 3 | 157948 | 157959 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 114329808 |