Hexa-nucleotide Imperfect Repeats of Citrus sinensis chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008334 | ATTCAT | 3 | 3020 | 3037 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | 114329637 |
2 | NC_008334 | CAAATC | 3 | 4761 | 4779 | 19 | 50 % | 16.67 % | 0 % | 33.33 % | 10 % | Non-Coding |
3 | NC_008334 | TAAGTA | 3 | 15766 | 15783 | 18 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
4 | NC_008334 | CTCTTG | 3 | 20149 | 20166 | 18 | 0 % | 50 % | 16.67 % | 33.33 % | 5 % | 114329646 |
5 | NC_008334 | AATTTA | 3 | 28993 | 29011 | 19 | 50 % | 50 % | 0 % | 0 % | 10 % | Non-Coding |
6 | NC_008334 | TCGAAT | 3 | 54177 | 54195 | 19 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
7 | NC_008334 | AATCAA | 3 | 62203 | 62219 | 17 | 66.67 % | 16.67 % | 0 % | 16.67 % | 5 % | Non-Coding |
8 | NC_008334 | GAAGGA | 3 | 96701 | 96718 | 18 | 50 % | 0 % | 50 % | 0 % | 5 % | 114329702 |
9 | NC_008334 | TATTAG | 4 | 103933 | 103955 | 23 | 33.33 % | 50 % | 16.67 % | 0 % | 4 % | 114329716 |
10 | NC_008334 | TCCTTT | 3 | 107419 | 107436 | 18 | 0 % | 66.67 % | 0 % | 33.33 % | 5 % | 114329716 |
11 | NC_008334 | TTCTTT | 3 | 127965 | 127982 | 18 | 0 % | 83.33 % | 0 % | 16.67 % | 5 % | 114329716 |
12 | NC_008334 | ATCAAT | 3 | 128492 | 128510 | 19 | 50 % | 33.33 % | 0 % | 16.67 % | 5 % | 114329716 |
13 | NC_008334 | AAAGGA | 3 | 140438 | 140455 | 18 | 66.67 % | 0 % | 33.33 % | 0 % | 5 % | 114329716 |
14 | NC_008334 | ACTAAT | 4 | 143918 | 143940 | 23 | 50 % | 33.33 % | 0 % | 16.67 % | 4 % | 114329716 |
15 | NC_008334 | CTCCTT | 3 | 151155 | 151172 | 18 | 0 % | 50 % | 0 % | 50 % | 5 % | 114329720 |