Tri-nucleotide Imperfect Repeats of Citrus sinensis chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008334 | TAA | 4 | 268 | 278 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
2 | NC_008334 | ATT | 7 | 1743 | 1766 | 24 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
3 | NC_008334 | ATA | 4 | 1831 | 1842 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
4 | NC_008334 | ATA | 4 | 10764 | 10774 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
5 | NC_008334 | ATT | 5 | 10785 | 10799 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
6 | NC_008334 | ATT | 4 | 10812 | 10822 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
7 | NC_008334 | AAC | 4 | 12263 | 12274 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 114329641 |
8 | NC_008334 | ATT | 5 | 13432 | 13447 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 114329642 |
9 | NC_008334 | TTA | 4 | 14097 | 14108 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
10 | NC_008334 | TAA | 4 | 14734 | 14745 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
11 | NC_008334 | TTC | 4 | 23918 | 23928 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 114329647 |
12 | NC_008334 | GTT | 4 | 24864 | 24875 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 114329647 |
13 | NC_008334 | TAG | 4 | 29613 | 29624 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | Non-Coding |
14 | NC_008334 | TAA | 4 | 29851 | 29862 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
15 | NC_008334 | TTA | 4 | 29889 | 29900 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
16 | NC_008334 | TAA | 4 | 30762 | 30773 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 0 % | Non-Coding |
17 | NC_008334 | TCT | 4 | 32240 | 32250 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
18 | NC_008334 | AGA | 4 | 32452 | 32462 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
19 | NC_008334 | ATA | 5 | 33778 | 33792 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
20 | NC_008334 | CTT | 5 | 38103 | 38117 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 193735607 |
21 | NC_008334 | TAT | 4 | 39325 | 39335 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
22 | NC_008334 | ATA | 4 | 39357 | 39368 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
23 | NC_008334 | ATG | 4 | 42011 | 42021 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 114329655 |
24 | NC_008334 | TCT | 4 | 45220 | 45231 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
25 | NC_008334 | CAA | 4 | 53949 | 53959 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | Non-Coding |
26 | NC_008334 | ATT | 6 | 54513 | 54531 | 19 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | Non-Coding |
27 | NC_008334 | ATT | 4 | 54791 | 54802 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | Non-Coding |
28 | NC_008334 | ATA | 4 | 57863 | 57873 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 114329663 |
29 | NC_008334 | TAA | 4 | 62631 | 62643 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
30 | NC_008334 | CTG | 4 | 70664 | 70674 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | Non-Coding |
31 | NC_008334 | ATA | 5 | 70891 | 70904 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
32 | NC_008334 | TTC | 4 | 73739 | 73750 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
33 | NC_008334 | TAT | 5 | 83939 | 83952 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 114329702 |
34 | NC_008334 | CTT | 4 | 86159 | 86170 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 114329702 |
35 | NC_008334 | TAA | 4 | 87759 | 87771 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 114329702 |
36 | NC_008334 | GAT | 4 | 88911 | 88921 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 114329702 |
37 | NC_008334 | GAT | 4 | 90311 | 90321 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 114329702 |
38 | NC_008334 | CTT | 4 | 91839 | 91849 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 114329702 |
39 | NC_008334 | AAG | 4 | 97941 | 97952 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 0 % | 114329702 |
40 | NC_008334 | TTC | 4 | 103314 | 103325 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 114329716 |
41 | NC_008334 | GAA | 5 | 113801 | 113815 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 114329716 |
42 | NC_008334 | TAT | 4 | 115435 | 115447 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 114329716 |
43 | NC_008334 | ACA | 4 | 118753 | 118764 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 114329716 |
44 | NC_008334 | CTT | 4 | 120252 | 120263 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 114329716 |
45 | NC_008334 | AAT | 5 | 122864 | 122878 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | 114329716 |
46 | NC_008334 | TCT | 4 | 125620 | 125632 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 114329716 |
47 | NC_008334 | TAA | 4 | 128422 | 128433 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 114329716 |
48 | NC_008334 | GCC | 4 | 128920 | 128931 | 12 | 0 % | 0 % | 33.33 % | 66.67 % | 8 % | 114329716 |
49 | NC_008334 | TTC | 6 | 134055 | 134073 | 19 | 0 % | 66.67 % | 0 % | 33.33 % | 10 % | 114329716 |
50 | NC_008334 | GAA | 4 | 144549 | 144560 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 114329716 |
51 | NC_008334 | CTA | 4 | 148741 | 148751 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 114329718 |
52 | NC_008334 | CTT | 4 | 149922 | 149933 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
53 | NC_008334 | ACC | 4 | 153043 | 153053 | 11 | 33.33 % | 0 % | 0 % | 66.67 % | 9 % | 114329720 |
54 | NC_008334 | GAA | 4 | 156024 | 156034 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 114329720 |
55 | NC_008334 | ATC | 4 | 157553 | 157563 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
56 | NC_008334 | ATC | 4 | 158953 | 158963 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 114329722 |