Penta-nucleotide Imperfect Repeats of Liriodendron tulipifera chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008326 | TCTCT | 3 | 5227 | 5240 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 114107028 |
2 | NC_008326 | ATTTT | 3 | 5808 | 5822 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 114107028 |
3 | NC_008326 | TAAAG | 3 | 7183 | 7198 | 16 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
4 | NC_008326 | GATAA | 3 | 8724 | 8738 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
5 | NC_008326 | GTCTT | 3 | 28406 | 28419 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | Non-Coding |
6 | NC_008326 | TAAAG | 3 | 34906 | 34921 | 16 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
7 | NC_008326 | TTCCT | 3 | 44597 | 44610 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
8 | NC_008326 | TATTA | 3 | 49319 | 49332 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_008326 | TTGTT | 3 | 55912 | 55925 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
10 | NC_008326 | ATCCA | 3 | 58047 | 58061 | 15 | 40 % | 20 % | 0 % | 40 % | 6 % | Non-Coding |
11 | NC_008326 | TTGCA | 3 | 70556 | 70569 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | Non-Coding |
12 | NC_008326 | CATTC | 3 | 79143 | 79156 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 114107070 |
13 | NC_008326 | TCCGG | 3 | 98657 | 98671 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 114107070 |
14 | NC_008326 | TTTCG | 3 | 101255 | 101268 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 114107070 |
15 | NC_008326 | CTTTT | 3 | 112501 | 112514 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 114107105 |
16 | NC_008326 | AAAGA | 3 | 114583 | 114597 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 114107105 |
17 | NC_008326 | TAAAA | 3 | 116911 | 116924 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 114107105 |
18 | NC_008326 | TTATT | 3 | 123457 | 123470 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 114107105 |
19 | NC_008326 | CGAAA | 3 | 146769 | 146782 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | Non-Coding |
20 | NC_008326 | ACCGG | 3 | 149365 | 149379 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
21 | NC_008326 | CATAC | 3 | 150698 | 150711 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |