Tri-nucleotide Imperfect Repeats of Brassica napus mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008285 | CTA | 4 | 1350 | 1361 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
2 | NC_008285 | CAG | 4 | 2692 | 2703 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
3 | NC_008285 | TGT | 4 | 8486 | 8497 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 11225384 |
4 | NC_008285 | TGA | 4 | 9286 | 9297 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 11225384 |
5 | NC_008285 | TGC | 4 | 17484 | 17495 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
6 | NC_008285 | AGC | 4 | 20551 | 20562 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
7 | NC_008285 | CAC | 4 | 21033 | 21043 | 11 | 33.33 % | 0 % | 0 % | 66.67 % | 9 % | Non-Coding |
8 | NC_008285 | GAA | 4 | 21514 | 21525 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
9 | NC_008285 | AGA | 4 | 22872 | 22882 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
10 | NC_008285 | ATT | 4 | 24228 | 24239 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11225387 |
11 | NC_008285 | ATA | 4 | 26608 | 26620 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 11225387 |
12 | NC_008285 | CTT | 4 | 26648 | 26658 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11225387 |
13 | NC_008285 | TGC | 4 | 29801 | 29811 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 11225387 |
14 | NC_008285 | CTT | 4 | 32025 | 32037 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225387 |
15 | NC_008285 | TTC | 4 | 38361 | 38371 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11225387 |
16 | NC_008285 | CAT | 4 | 42254 | 42264 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 11225387 |
17 | NC_008285 | ATC | 4 | 43953 | 43963 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 11225387 |
18 | NC_008285 | CAA | 4 | 47066 | 47076 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 11225387 |
19 | NC_008285 | GAA | 4 | 47597 | 47608 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 11225387 |
20 | NC_008285 | CTT | 4 | 51196 | 51207 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225387 |
21 | NC_008285 | AAT | 4 | 51286 | 51299 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 11225387 |
22 | NC_008285 | GTG | 4 | 53161 | 53171 | 11 | 0 % | 33.33 % | 66.67 % | 0 % | 9 % | 11225387 |
23 | NC_008285 | AGA | 4 | 59634 | 59644 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 11225387 |
24 | NC_008285 | TAT | 4 | 67978 | 67988 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 11225390 |
25 | NC_008285 | CGA | 4 | 74751 | 74762 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11225390 |
26 | NC_008285 | CTG | 4 | 75819 | 75830 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 11225390 |
27 | NC_008285 | TTC | 4 | 78792 | 78803 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225390 |
28 | NC_008285 | ATA | 4 | 82019 | 82030 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11225390 |
29 | NC_008285 | CTT | 4 | 84094 | 84106 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225390 |
30 | NC_008285 | TTC | 5 | 85093 | 85107 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 11225390 |
31 | NC_008285 | GTT | 4 | 86692 | 86703 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 0 % | 11225390 |
32 | NC_008285 | CTA | 5 | 88518 | 88531 | 14 | 33.33 % | 33.33 % | 0 % | 33.33 % | 7 % | 11225390 |
33 | NC_008285 | AAG | 4 | 94647 | 94657 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 11225390 |
34 | NC_008285 | AGC | 4 | 95009 | 95020 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11225390 |
35 | NC_008285 | GAA | 4 | 95871 | 95883 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 11225390 |
36 | NC_008285 | GAA | 4 | 99059 | 99069 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 11225390 |
37 | NC_008285 | AGG | 4 | 101562 | 101574 | 13 | 33.33 % | 0 % | 66.67 % | 0 % | 7 % | 11225390 |
38 | NC_008285 | CAG | 4 | 105233 | 105244 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11225390 |
39 | NC_008285 | ATA | 4 | 107545 | 107555 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11225390 |
40 | NC_008285 | TCA | 4 | 110294 | 110304 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 11225390 |
41 | NC_008285 | TCT | 4 | 111473 | 111485 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225390 |
42 | NC_008285 | GAA | 4 | 123033 | 123043 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 11225390 |
43 | NC_008285 | GCT | 4 | 124633 | 124643 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 11225390 |
44 | NC_008285 | GGA | 4 | 127140 | 127151 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 11225390 |
45 | NC_008285 | CGA | 4 | 127635 | 127645 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | 11225390 |
46 | NC_008285 | AAT | 4 | 130236 | 130248 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 11225390 |
47 | NC_008285 | TCT | 4 | 137916 | 137926 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11225390 |
48 | NC_008285 | AGC | 4 | 138644 | 138654 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | 11225390 |
49 | NC_008285 | TCT | 4 | 139829 | 139840 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225390 |
50 | NC_008285 | ATA | 4 | 140118 | 140130 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 11225390 |
51 | NC_008285 | AGG | 5 | 140268 | 140282 | 15 | 33.33 % | 0 % | 66.67 % | 0 % | 6 % | 11225390 |
52 | NC_008285 | TCT | 4 | 140813 | 140823 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11225390 |
53 | NC_008285 | CTT | 4 | 143597 | 143608 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225390 |
54 | NC_008285 | CAA | 4 | 143671 | 143682 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 11225390 |
55 | NC_008285 | TTC | 4 | 145824 | 145836 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225390 |
56 | NC_008285 | GTA | 4 | 146235 | 146245 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 11225390 |
57 | NC_008285 | ATG | 4 | 146689 | 146699 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 11225390 |
58 | NC_008285 | CGT | 4 | 147898 | 147910 | 13 | 0 % | 33.33 % | 33.33 % | 33.33 % | 7 % | 11225390 |
59 | NC_008285 | GCC | 4 | 148326 | 148336 | 11 | 0 % | 0 % | 33.33 % | 66.67 % | 9 % | 11225390 |
60 | NC_008285 | GCA | 4 | 150014 | 150025 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11225390 |
61 | NC_008285 | CTT | 4 | 150130 | 150141 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225390 |
62 | NC_008285 | TTG | 4 | 150483 | 150494 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 11225390 |
63 | NC_008285 | CGT | 4 | 152549 | 152559 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 11225390 |
64 | NC_008285 | CAG | 4 | 154123 | 154134 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11225390 |
65 | NC_008285 | GGT | 4 | 160232 | 160242 | 11 | 0 % | 33.33 % | 66.67 % | 0 % | 9 % | 11225390 |
66 | NC_008285 | CTT | 4 | 166556 | 166568 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225390 |
67 | NC_008285 | ATT | 5 | 169311 | 169326 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 11225390 |
68 | NC_008285 | TAG | 4 | 173229 | 173240 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 11225390 |
69 | NC_008285 | AAC | 4 | 173602 | 173614 | 13 | 66.67 % | 0 % | 0 % | 33.33 % | 7 % | 11225390 |
70 | NC_008285 | CTT | 4 | 175659 | 175669 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11225390 |
71 | NC_008285 | CCG | 4 | 178088 | 178099 | 12 | 0 % | 0 % | 33.33 % | 66.67 % | 8 % | Non-Coding |
72 | NC_008285 | TCC | 4 | 182813 | 182824 | 12 | 0 % | 33.33 % | 0 % | 66.67 % | 8 % | Non-Coding |
73 | NC_008285 | CTC | 5 | 182924 | 182938 | 15 | 0 % | 33.33 % | 0 % | 66.67 % | 6 % | Non-Coding |
74 | NC_008285 | TCT | 4 | 183459 | 183470 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225391 |
75 | NC_008285 | CTA | 4 | 185494 | 185505 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 11225391 |
76 | NC_008285 | GAA | 4 | 188503 | 188514 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
77 | NC_008285 | GGC | 4 | 191383 | 191395 | 13 | 0 % | 0 % | 66.67 % | 33.33 % | 7 % | 11225392 |
78 | NC_008285 | TCT | 4 | 192394 | 192405 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225392 |
79 | NC_008285 | CTA | 4 | 193709 | 193719 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 11225392 |
80 | NC_008285 | TAT | 4 | 194549 | 194559 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 11225392 |
81 | NC_008285 | ACT | 5 | 195256 | 195270 | 15 | 33.33 % | 33.33 % | 0 % | 33.33 % | 6 % | 11225392 |
82 | NC_008285 | CTT | 4 | 195658 | 195669 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225392 |
83 | NC_008285 | CGC | 4 | 199080 | 199090 | 11 | 0 % | 0 % | 33.33 % | 66.67 % | 9 % | 11225392 |
84 | NC_008285 | AAT | 4 | 199091 | 199102 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11225392 |
85 | NC_008285 | TAT | 4 | 200407 | 200419 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 11225392 |
86 | NC_008285 | CGA | 4 | 200567 | 200578 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11225392 |
87 | NC_008285 | AGA | 4 | 200677 | 200689 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 11225392 |
88 | NC_008285 | AGG | 5 | 202479 | 202493 | 15 | 33.33 % | 0 % | 66.67 % | 0 % | 6 % | 11225392 |
89 | NC_008285 | CGA | 4 | 204104 | 204114 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | 11225392 |
90 | NC_008285 | TCT | 4 | 205497 | 205508 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225392 |
91 | NC_008285 | TTC | 4 | 205990 | 206001 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225392 |
92 | NC_008285 | TCT | 4 | 206787 | 206798 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 11225392 |
93 | NC_008285 | TTC | 4 | 207193 | 207205 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225392 |
94 | NC_008285 | CTT | 4 | 209002 | 209014 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11225392 |
95 | NC_008285 | TTC | 5 | 210001 | 210015 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 11225392 |
96 | NC_008285 | CTT | 8 | 211960 | 211983 | 24 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | 11225392 |
97 | NC_008285 | GGT | 4 | 214412 | 214423 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 11225392 |
98 | NC_008285 | AGA | 6 | 216782 | 216800 | 19 | 66.67 % | 0 % | 33.33 % | 0 % | 10 % | 11225392 |
99 | NC_008285 | TTC | 4 | 220190 | 220200 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11225392 |