Penta-nucleotide Imperfect Repeats of Zygnema circumcarinatum chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008117 | AGTAA | 3 | 326 | 339 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
2 | NC_008117 | ACTTA | 18 | 3275 | 3365 | 91 | 40 % | 40 % | 0 % | 20 % | 3 % | Non-Coding |
3 | NC_008117 | AGAAT | 15 | 18106 | 18180 | 75 | 60 % | 20 % | 20 % | 0 % | 6 % | 108796740 |
4 | NC_008117 | TTCTT | 17 | 18182 | 18266 | 85 | 0 % | 80 % | 0 % | 20 % | 3 % | 108796740 |
5 | NC_008117 | CAATA | 3 | 20897 | 20911 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | 108796740 |
6 | NC_008117 | TTATA | 3 | 22357 | 22371 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 108796749 |
7 | NC_008117 | AGTTA | 20 | 32433 | 32532 | 100 | 40 % | 40 % | 20 % | 0 % | 7 % | Non-Coding |
8 | NC_008117 | AATAC | 3 | 39746 | 39760 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | 108796727 |
9 | NC_008117 | CTAAG | 3 | 42328 | 42342 | 15 | 40 % | 20 % | 20 % | 20 % | 6 % | 108796750 |
10 | NC_008117 | AAAGA | 3 | 48084 | 48098 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 108796712 |
11 | NC_008117 | ATAGA | 10 | 49993 | 50042 | 50 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
12 | NC_008117 | ATTTC | 5 | 53130 | 53154 | 25 | 20 % | 60 % | 0 % | 20 % | 4 % | Non-Coding |
13 | NC_008117 | ATTCT | 16 | 60104 | 60183 | 80 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
14 | NC_008117 | AAACA | 3 | 63425 | 63439 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | Non-Coding |
15 | NC_008117 | AAAAT | 3 | 64182 | 64196 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 126507953 |
16 | NC_008117 | TAATT | 3 | 66041 | 66055 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
17 | NC_008117 | TAACT | 3 | 74599 | 74613 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
18 | NC_008117 | TCAAA | 4 | 84995 | 85014 | 20 | 60 % | 20 % | 0 % | 20 % | 5 % | Non-Coding |
19 | NC_008117 | AAATT | 3 | 89498 | 89511 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 108796694 |
20 | NC_008117 | ATTAT | 16 | 92689 | 92768 | 80 | 40 % | 60 % | 0 % | 0 % | 8 % | Non-Coding |
21 | NC_008117 | TAAAA | 3 | 94613 | 94628 | 16 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
22 | NC_008117 | TAGGT | 3 | 109792 | 109806 | 15 | 20 % | 40 % | 40 % | 0 % | 6 % | Non-Coding |
23 | NC_008117 | TATAT | 3 | 120618 | 120633 | 16 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
24 | NC_008117 | CTTTA | 3 | 129803 | 129816 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 108796684 |
25 | NC_008117 | TGTGT | 3 | 132835 | 132848 | 14 | 0 % | 60 % | 40 % | 0 % | 7 % | 108796769 |
26 | NC_008117 | ATTAT | 3 | 140216 | 140231 | 16 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
27 | NC_008117 | TAATA | 8 | 143447 | 143490 | 44 | 60 % | 40 % | 0 % | 0 % | 9 % | Non-Coding |
28 | NC_008117 | AAAAT | 4 | 152168 | 152186 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
29 | NC_008117 | TAGAA | 3 | 154343 | 154357 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | 108796737 |
30 | NC_008117 | TATTC | 9 | 161666 | 161710 | 45 | 20 % | 60 % | 0 % | 20 % | 8 % | Non-Coding |