Tetra-nucleotide Imperfect Repeats of Helicosporidium sp. ex Simulium jonesii plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008100 | TATT | 5 | 4259 | 4277 | 19 | 25 % | 75 % | 0 % | 0 % | 10 % | 108773399 |
| 2 | NC_008100 | AAAT | 3 | 4534 | 4545 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 108773399 |
| 3 | NC_008100 | AATT | 3 | 4888 | 4899 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 108773399 |
| 4 | NC_008100 | ATTA | 3 | 5064 | 5075 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 108773399 |
| 5 | NC_008100 | AAAT | 3 | 5834 | 5846 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 108773399 |
| 6 | NC_008100 | TTAA | 3 | 5923 | 5934 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 108773399 |
| 7 | NC_008100 | TTTA | 3 | 7280 | 7290 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 108773399 |
| 8 | NC_008100 | AAAT | 3 | 9226 | 9236 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 108773400 |
| 9 | NC_008100 | TAAA | 3 | 10085 | 10096 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 108773422 |
| 10 | NC_008100 | TTTA | 3 | 12811 | 12822 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_008100 | TAAA | 3 | 12823 | 12833 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_008100 | ATTT | 3 | 14107 | 14117 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 108773401 |
| 13 | NC_008100 | GAAA | 3 | 14168 | 14178 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 108773401 |
| 14 | NC_008100 | AAAG | 3 | 15205 | 15216 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 108773403 |
| 15 | NC_008100 | ATTC | 3 | 15699 | 15709 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 108773403 |
| 16 | NC_008100 | TTCT | 3 | 17115 | 17125 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 108773403 |
| 17 | NC_008100 | AATT | 3 | 18350 | 18362 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 108773403 |
| 18 | NC_008100 | ATTT | 3 | 23277 | 23287 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 108773405 |
| 19 | NC_008100 | TGTT | 3 | 23745 | 23755 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 108773405 |
| 20 | NC_008100 | AAAT | 3 | 24438 | 24449 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 108773405 |
| 21 | NC_008100 | TTAA | 3 | 24695 | 24706 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 108773405 |
| 22 | NC_008100 | TTGT | 3 | 25982 | 25993 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 108773406 |
| 23 | NC_008100 | AAAT | 3 | 27178 | 27189 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 108773406 |
| 24 | NC_008100 | AATA | 3 | 27888 | 27899 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 108773406 |
| 25 | NC_008100 | ATTT | 4 | 28124 | 28139 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 108773406 |
| 26 | NC_008100 | TTTA | 3 | 28214 | 28224 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 108773406 |
| 27 | NC_008100 | TTTA | 3 | 28355 | 28367 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 108773406 |
| 28 | NC_008100 | ATTT | 3 | 29329 | 29339 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 108773408 |
| 29 | NC_008100 | AAAT | 3 | 32700 | 32710 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 108773415 |
| 30 | NC_008100 | TAAA | 3 | 33597 | 33608 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 108773417 |
| 31 | NC_008100 | TAAT | 4 | 34616 | 34631 | 16 | 50 % | 50 % | 0 % | 0 % | 0 % | 108773418 |