Tetra-nucleotide Imperfect Repeats of Solanum tuberosum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008096 | AAGT | 3 | 1248 | 1258 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 108773110 |
| 2 | NC_008096 | GATT | 3 | 2582 | 2592 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 108773111 |
| 3 | NC_008096 | GAAA | 3 | 4491 | 4501 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 4 | NC_008096 | AATA | 3 | 4667 | 4677 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_008096 | AATA | 3 | 5980 | 5991 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 108773112 |
| 6 | NC_008096 | GTTT | 3 | 7371 | 7383 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 7 | NC_008096 | TTCT | 3 | 7813 | 7823 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 108773113 |
| 8 | NC_008096 | CAAG | 3 | 8903 | 8913 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 9 | NC_008096 | AAAG | 3 | 9519 | 9529 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_008096 | ATGA | 3 | 12470 | 12482 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 108773116 |
| 11 | NC_008096 | TAAA | 3 | 13281 | 13292 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 12 | NC_008096 | GGGA | 3 | 13482 | 13492 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 13 | NC_008096 | TATT | 4 | 14550 | 14564 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 14 | NC_008096 | GTAA | 3 | 14910 | 14922 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 15 | NC_008096 | TATT | 3 | 15941 | 15953 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 16 | NC_008096 | AAAC | 3 | 18750 | 18760 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 108773120 |
| 17 | NC_008096 | GAAT | 3 | 19338 | 19348 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 108773120 |
| 18 | NC_008096 | GTTT | 3 | 23857 | 23868 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 108773121 |
| 19 | NC_008096 | CTAT | 3 | 30353 | 30364 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 20 | NC_008096 | TTAA | 3 | 30482 | 30492 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 108773124 |
| 21 | NC_008096 | TTTA | 3 | 30837 | 30848 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 22 | NC_008096 | ATTT | 3 | 33051 | 33061 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 23 | NC_008096 | TATT | 3 | 33268 | 33279 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 24 | NC_008096 | TATC | 3 | 34861 | 34872 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 108773126 |
| 25 | NC_008096 | CTTT | 3 | 36240 | 36250 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 26 | NC_008096 | ATTG | 3 | 39454 | 39464 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 108773129 |
| 27 | NC_008096 | AATG | 3 | 41100 | 41111 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 108773130 |
| 28 | NC_008096 | CTAT | 3 | 42839 | 42850 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 29 | NC_008096 | TTTA | 3 | 42855 | 42866 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_008096 | TAAA | 4 | 43411 | 43426 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 31 | NC_008096 | TTTC | 4 | 44345 | 44360 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 108773131 |
| 32 | NC_008096 | TATT | 4 | 47391 | 47405 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 33 | NC_008096 | AAGG | 3 | 47617 | 47627 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 34 | NC_008096 | TGAT | 3 | 56394 | 56405 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_008096 | TTTA | 3 | 58444 | 58455 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_008096 | AATA | 4 | 65395 | 65409 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 37 | NC_008096 | CAAA | 3 | 65745 | 65756 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 38 | NC_008096 | TTTC | 3 | 66790 | 66800 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 39 | NC_008096 | AAAT | 3 | 68591 | 68602 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_008096 | AAAT | 3 | 69691 | 69702 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_008096 | AAAC | 3 | 69786 | 69797 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 42 | NC_008096 | GAAA | 3 | 70213 | 70224 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_008096 | TGAA | 3 | 70721 | 70732 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 44 | NC_008096 | GGTT | 3 | 75193 | 75204 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 108773194 |
| 45 | NC_008096 | CTTT | 3 | 81677 | 81688 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 108773194 |
| 46 | NC_008096 | TTTA | 3 | 82189 | 82200 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 108773194 |
| 47 | NC_008096 | ACTT | 3 | 83724 | 83734 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 108773194 |
| 48 | NC_008096 | CAAT | 3 | 84437 | 84447 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 108773194 |
| 49 | NC_008096 | GAAA | 3 | 89591 | 89603 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 108773194 |
| 50 | NC_008096 | AATA | 3 | 93377 | 93389 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 108773194 |
| 51 | NC_008096 | ATCC | 3 | 103899 | 103910 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 108773195 |
| 52 | NC_008096 | AAGG | 3 | 104207 | 104217 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 108773195 |
| 53 | NC_008096 | GAGG | 3 | 106933 | 106944 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 108773195 |
| 54 | NC_008096 | AGGT | 3 | 107145 | 107156 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 108773195 |
| 55 | NC_008096 | TAAG | 3 | 108265 | 108275 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 108773195 |
| 56 | NC_008096 | GGAA | 3 | 110358 | 110368 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 108773195 |
| 57 | NC_008096 | AAAT | 3 | 112874 | 112884 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 108773195 |
| 58 | NC_008096 | GAAA | 3 | 116842 | 116853 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 108773195 |
| 59 | NC_008096 | ATGA | 3 | 118732 | 118743 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 108773195 |
| 60 | NC_008096 | TTGA | 3 | 118924 | 118935 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 108773195 |
| 61 | NC_008096 | AAAG | 3 | 121942 | 121952 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 108773195 |
| 62 | NC_008096 | ATTT | 3 | 122017 | 122028 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 108773195 |
| 63 | NC_008096 | TAGA | 3 | 122870 | 122881 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 108773195 |
| 64 | NC_008096 | AGGT | 3 | 124941 | 124951 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 108773195 |
| 65 | NC_008096 | TTTA | 3 | 126099 | 126110 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 108773195 |
| 66 | NC_008096 | AAAG | 3 | 128550 | 128560 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 108773195 |
| 67 | NC_008096 | TTCT | 3 | 128962 | 128972 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 108773195 |
| 68 | NC_008096 | CTTT | 3 | 129414 | 129424 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 108773195 |
| 69 | NC_008096 | TTCC | 3 | 130666 | 130676 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 108773195 |
| 70 | NC_008096 | CTTA | 3 | 132759 | 132769 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 108773195 |
| 71 | NC_008096 | CCTT | 3 | 136817 | 136827 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 108773195 |
| 72 | NC_008096 | GGAT | 3 | 137124 | 137135 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 108773195 |
| 73 | NC_008096 | TATT | 3 | 147645 | 147657 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 108773191 |
| 74 | NC_008096 | TGAT | 3 | 148647 | 148659 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 108773191 |
| 75 | NC_008096 | GATC | 3 | 148674 | 148684 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 108773191 |