Penta-nucleotide Imperfect Repeats of Helianthus annuus chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_007977 | TCTCT | 3 | 5368 | 5381 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 94502473 |
2 | NC_007977 | ACAAA | 3 | 30755 | 30769 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | Non-Coding |
3 | NC_007977 | AGATT | 3 | 35911 | 35925 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
4 | NC_007977 | TTTAT | 3 | 42634 | 42649 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | 94502492 |
5 | NC_007977 | TTTCT | 3 | 43030 | 43043 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 94502492 |
6 | NC_007977 | TTTTA | 3 | 47577 | 47590 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
7 | NC_007977 | ATTTT | 3 | 48068 | 48082 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
8 | NC_007977 | AAGAA | 3 | 67799 | 67812 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
9 | NC_007977 | GATAA | 3 | 69573 | 69587 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | 94502470 |
10 | NC_007977 | AGAAA | 4 | 82098 | 82116 | 19 | 80 % | 0 % | 20 % | 0 % | 10 % | 94502470 |
11 | NC_007977 | TCCGG | 3 | 93093 | 93107 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 94502470 |
12 | NC_007977 | TTTCG | 3 | 95665 | 95678 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 94502470 |
13 | NC_007977 | AAATA | 3 | 109689 | 109703 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 94502551 |
14 | NC_007977 | ACAAA | 3 | 111225 | 111239 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | 94502551 |
15 | NC_007977 | TAATA | 3 | 136645 | 136660 | 16 | 60 % | 40 % | 0 % | 0 % | 6 % | 94502551 |
16 | NC_007977 | ACCGG | 3 | 141527 | 141541 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
17 | NC_007977 | TACAT | 4 | 142266 | 142285 | 20 | 40 % | 40 % | 0 % | 20 % | 10 % | Non-Coding |