Tetra-nucleotide Imperfect Repeats of Helianthus annuus chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007977 | AAGT | 3 | 1163 | 1173 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 94502471 |
| 2 | NC_007977 | TAAA | 3 | 1819 | 1830 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_007977 | GAAA | 3 | 4497 | 4507 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 4 | NC_007977 | GATA | 3 | 5082 | 5093 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_007977 | TTCT | 3 | 7865 | 7875 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 94502474 |
| 6 | NC_007977 | ATCT | 3 | 8271 | 8281 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 7 | NC_007977 | TTAT | 3 | 10097 | 10107 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_007977 | ATTA | 3 | 10620 | 10630 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_007977 | TTCT | 3 | 11266 | 11278 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 10 | NC_007977 | ATTC | 3 | 17156 | 17166 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 270039756 |
| 11 | NC_007977 | TTTC | 3 | 17359 | 17370 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 270039756 |
| 12 | NC_007977 | AACA | 3 | 23978 | 23988 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 94502481 |
| 13 | NC_007977 | ACTT | 3 | 24650 | 24660 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 94502482 |
| 14 | NC_007977 | TAAA | 3 | 30987 | 30999 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 15 | NC_007977 | GAAA | 3 | 33957 | 33968 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 94502487 |
| 16 | NC_007977 | TGTA | 3 | 35515 | 35525 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_007977 | GATC | 3 | 36567 | 36577 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 18 | NC_007977 | AATT | 3 | 38265 | 38275 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 94502490 |
| 19 | NC_007977 | AATG | 3 | 39912 | 39923 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 94502491 |
| 20 | NC_007977 | CTTT | 3 | 43130 | 43140 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 94502492 |
| 21 | NC_007977 | ATTT | 3 | 44008 | 44019 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 94502492 |
| 22 | NC_007977 | TATT | 3 | 46082 | 46093 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_007977 | ATAG | 3 | 46878 | 46888 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 24 | NC_007977 | AAAT | 3 | 56133 | 56143 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_007977 | AATA | 3 | 60482 | 60492 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 26 | NC_007977 | ATTG | 3 | 61126 | 61136 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 94502503 |
| 27 | NC_007977 | AATT | 3 | 63054 | 63064 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_007977 | TTTG | 3 | 63635 | 63646 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 94502506 |
| 29 | NC_007977 | ATCT | 3 | 64482 | 64493 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 30 | NC_007977 | AAGA | 3 | 65969 | 65980 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 31 | NC_007977 | ATCT | 3 | 66850 | 66861 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_007977 | TAAA | 3 | 67195 | 67206 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 94502512 |
| 33 | NC_007977 | TATT | 3 | 67320 | 67331 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 34 | NC_007977 | TGAA | 3 | 68338 | 68349 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_007977 | TTTC | 3 | 68372 | 68384 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 36 | NC_007977 | TTTC | 3 | 68495 | 68506 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 37 | NC_007977 | AAGA | 3 | 69650 | 69661 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 94502470 |
| 38 | NC_007977 | ATTG | 3 | 70742 | 70753 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 94502470 |
| 39 | NC_007977 | CTTT | 3 | 71751 | 71761 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 94502470 |
| 40 | NC_007977 | GGTT | 3 | 72789 | 72800 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 94502470 |
| 41 | NC_007977 | TTTA | 3 | 73358 | 73368 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 94502470 |
| 42 | NC_007977 | TAAA | 3 | 73592 | 73602 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 94502470 |
| 43 | NC_007977 | TTTC | 3 | 74491 | 74501 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 94502470 |
| 44 | NC_007977 | AAGT | 3 | 74912 | 74922 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 94502470 |
| 45 | NC_007977 | AATC | 4 | 77596 | 77611 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 94502470 |
| 46 | NC_007977 | ATCA | 3 | 81463 | 81474 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 94502470 |
| 47 | NC_007977 | CAAT | 3 | 82245 | 82255 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 94502470 |
| 48 | NC_007977 | GAAA | 3 | 86962 | 86974 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 94502470 |
| 49 | NC_007977 | TGAT | 3 | 89847 | 89859 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 94502470 |
| 50 | NC_007977 | AATA | 3 | 90718 | 90730 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 94502470 |
| 51 | NC_007977 | CCCT | 3 | 96928 | 96938 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 94502470 |
| 52 | NC_007977 | ATCC | 3 | 101311 | 101322 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 94502551 |
| 53 | NC_007977 | TCTA | 3 | 101538 | 101549 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 94502551 |
| 54 | NC_007977 | AAGG | 3 | 101677 | 101687 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 94502551 |
| 55 | NC_007977 | GAGG | 3 | 104411 | 104422 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 94502551 |
| 56 | NC_007977 | AGGT | 3 | 104623 | 104634 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 94502551 |
| 57 | NC_007977 | TAAG | 3 | 105744 | 105754 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 94502551 |
| 58 | NC_007977 | TCTT | 3 | 110960 | 110971 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 94502551 |
| 59 | NC_007977 | GAAA | 3 | 111399 | 111410 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 94502551 |
| 60 | NC_007977 | ATAA | 3 | 112847 | 112857 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 94502551 |
| 61 | NC_007977 | AAGT | 3 | 113199 | 113209 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 94502551 |
| 62 | NC_007977 | ATTT | 3 | 114563 | 114574 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 94502551 |
| 63 | NC_007977 | AAAT | 3 | 115128 | 115138 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 94502551 |
| 64 | NC_007977 | TATT | 3 | 120717 | 120728 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 94502551 |
| 65 | NC_007977 | AAAT | 3 | 123501 | 123512 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 94502551 |
| 66 | NC_007977 | AAAT | 3 | 126124 | 126134 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 94502551 |
| 67 | NC_007977 | TTTA | 3 | 126371 | 126382 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 94502551 |
| 68 | NC_007977 | CTTA | 3 | 128881 | 128891 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 94502551 |
| 69 | NC_007977 | CCTT | 3 | 132948 | 132958 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 94502551 |
| 70 | NC_007977 | GGAT | 3 | 133313 | 133324 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 94502551 |
| 71 | NC_007977 | TATT | 3 | 143905 | 143917 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 94502554 |
| 72 | NC_007977 | TGAT | 3 | 144913 | 144925 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 94502554 |