Tetra-nucleotide Imperfect Repeats of Vitis vinifera chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007957 | GAAA | 3 | 256 | 267 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 2 | NC_007957 | AAGT | 3 | 1111 | 1121 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91983972 |
| 3 | NC_007957 | GATA | 3 | 1755 | 1767 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 4 | NC_007957 | TTAG | 3 | 4497 | 4507 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 5 | NC_007957 | GAAT | 3 | 7522 | 7533 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_007957 | TTTA | 3 | 7925 | 7935 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_007957 | ATTA | 3 | 7955 | 7965 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_007957 | CTAA | 3 | 8083 | 8094 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_007957 | TTCT | 3 | 8732 | 8742 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91983975 |
| 10 | NC_007957 | TGAA | 3 | 9289 | 9299 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91983976 |
| 11 | NC_007957 | AATA | 3 | 9301 | 9311 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_007957 | GAAA | 3 | 9378 | 9388 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 13 | NC_007957 | TTCT | 3 | 9930 | 9941 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_007957 | AAGA | 3 | 9987 | 9998 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 15 | NC_007957 | GTTA | 3 | 10383 | 10394 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_007957 | CCAT | 3 | 11164 | 11174 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 17 | NC_007957 | AATT | 3 | 11696 | 11707 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_007957 | TAAA | 3 | 12479 | 12490 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 91983977 |
| 19 | NC_007957 | TTAT | 3 | 14709 | 14719 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_007957 | AAAT | 3 | 15396 | 15407 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_007957 | AAGT | 3 | 16895 | 16905 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91983980 |
| 22 | NC_007957 | ACTT | 3 | 17085 | 17096 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 23 | NC_007957 | TTCA | 3 | 24314 | 24325 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 91983983 |
| 24 | NC_007957 | GAAT | 3 | 24409 | 24419 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91983983 |
| 25 | NC_007957 | GATA | 3 | 30231 | 30241 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 26 | NC_007957 | TTTA | 3 | 31198 | 31208 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_007957 | TCTA | 4 | 31747 | 31761 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 28 | NC_007957 | CTTC | 3 | 33763 | 33774 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 29 | NC_007957 | TTTC | 3 | 33944 | 33955 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 30 | NC_007957 | TAAA | 3 | 34116 | 34126 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_007957 | AATT | 3 | 34172 | 34182 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 32 | NC_007957 | TTCT | 3 | 34383 | 34393 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_007957 | GAAA | 3 | 37565 | 37576 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 91983988 |
| 34 | NC_007957 | TTGC | 3 | 37966 | 37976 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 91983988 |
| 35 | NC_007957 | TAGA | 4 | 39009 | 39024 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 36 | NC_007957 | AATA | 3 | 39660 | 39671 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_007957 | AAAT | 3 | 39990 | 40001 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 38 | NC_007957 | GATC | 3 | 40520 | 40530 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 39 | NC_007957 | AATG | 3 | 43869 | 43880 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91983992 |
| 40 | NC_007957 | TAAA | 3 | 46160 | 46170 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_007957 | AAGG | 3 | 51009 | 51019 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 42 | NC_007957 | CATA | 3 | 52392 | 52403 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | Non-Coding |
| 43 | NC_007957 | CTTT | 3 | 52516 | 52528 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 44 | NC_007957 | AAAT | 3 | 54427 | 54437 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 91983997 |
| 45 | NC_007957 | GTTT | 3 | 54629 | 54641 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 46 | NC_007957 | GTTT | 3 | 55585 | 55595 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 47 | NC_007957 | ATTT | 3 | 55599 | 55610 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 48 | NC_007957 | TGCA | 3 | 60320 | 60332 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 91984000 |
| 49 | NC_007957 | GTTA | 3 | 61393 | 61403 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 50 | NC_007957 | TATT | 3 | 61479 | 61490 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91984001 |
| 51 | NC_007957 | ATTA | 3 | 62017 | 62027 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 91984001 |
| 52 | NC_007957 | AATC | 3 | 68383 | 68394 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | Non-Coding |
| 53 | NC_007957 | TTCT | 4 | 69621 | 69636 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 54 | NC_007957 | ACCT | 3 | 70047 | 70058 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 55 | NC_007957 | TGAA | 3 | 73846 | 73857 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 56 | NC_007957 | TTTC | 3 | 73880 | 73892 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 57 | NC_007957 | AAGA | 3 | 75184 | 75195 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 91984052 |
| 58 | NC_007957 | AGAA | 3 | 76927 | 76937 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 91984052 |
| 59 | NC_007957 | CAAA | 3 | 79023 | 79034 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 91984052 |
| 60 | NC_007957 | CAAT | 3 | 87750 | 87760 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 91984052 |
| 61 | NC_007957 | TTAC | 3 | 89253 | 89263 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 91984052 |
| 62 | NC_007957 | TTCT | 3 | 92853 | 92863 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91984052 |
| 63 | NC_007957 | CTTT | 3 | 94046 | 94056 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91984052 |
| 64 | NC_007957 | TGAT | 3 | 95880 | 95892 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91984052 |
| 65 | NC_007957 | AATA | 3 | 96805 | 96817 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 91984052 |
| 66 | NC_007957 | TTAT | 5 | 104174 | 104193 | 20 | 25 % | 75 % | 0 % | 0 % | 5 % | 91984052 |
| 67 | NC_007957 | ATCC | 3 | 107887 | 107898 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 91984052 |
| 68 | NC_007957 | TCTA | 3 | 108283 | 108294 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 91984052 |
| 69 | NC_007957 | AAGG | 3 | 108422 | 108432 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 91984052 |
| 70 | NC_007957 | GAGG | 3 | 111145 | 111156 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 91984052 |
| 71 | NC_007957 | AGGT | 3 | 111357 | 111368 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 91984052 |
| 72 | NC_007957 | TAAG | 3 | 112477 | 112487 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91984052 |
| 73 | NC_007957 | AAAT | 3 | 117103 | 117113 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 91984052 |
| 74 | NC_007957 | ATAA | 3 | 117782 | 117793 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 91984052 |
| 75 | NC_007957 | TTGT | 3 | 119324 | 119334 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 91984052 |
| 76 | NC_007957 | GATT | 3 | 120264 | 120276 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91984052 |
| 77 | NC_007957 | ATGA | 3 | 120442 | 120452 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91984052 |
| 78 | NC_007957 | ATTT | 3 | 121733 | 121743 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 91984052 |
| 79 | NC_007957 | TAGA | 3 | 121856 | 121867 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91984052 |
| 80 | NC_007957 | ATGA | 3 | 123724 | 123735 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91984052 |
| 81 | NC_007957 | AAGA | 3 | 126879 | 126890 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 91984052 |
| 82 | NC_007957 | AATC | 3 | 127317 | 127328 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 91984052 |
| 83 | NC_007957 | GAAT | 3 | 127476 | 127486 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91984052 |
| 84 | NC_007957 | CATT | 3 | 131847 | 131858 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 91984052 |
| 85 | NC_007957 | TGAT | 3 | 132573 | 132583 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 91984052 |
| 86 | NC_007957 | AAAG | 3 | 133419 | 133430 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 91984052 |
| 87 | NC_007957 | CTTA | 3 | 137573 | 137583 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 91984052 |
| 88 | NC_007957 | CCTT | 3 | 141628 | 141638 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 91984052 |
| 89 | NC_007957 | GGAT | 3 | 142162 | 142173 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 91984052 |
| 90 | NC_007957 | ATAA | 5 | 145867 | 145886 | 20 | 75 % | 25 % | 0 % | 0 % | 5 % | 91984052 |
| 91 | NC_007957 | ATCA | 3 | 154168 | 154180 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 91984056 |
| 92 | NC_007957 | TGAT | 3 | 154263 | 154275 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91984056 |
| 93 | NC_007957 | AAAG | 3 | 156004 | 156014 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 91984056 |
| 94 | NC_007957 | ATTT | 3 | 157070 | 157081 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91984056 |