Tetra-nucleotide Imperfect Repeats of Gossypium hirsutum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007944 | AAGT | 3 | 1131 | 1141 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208882 |
| 2 | NC_007944 | AAAT | 3 | 2061 | 2072 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_007944 | ATCT | 3 | 4720 | 4731 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_007944 | TTCA | 3 | 4985 | 4996 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_007944 | AAAT | 4 | 6504 | 6519 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_007944 | ATAG | 3 | 8387 | 8398 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 7 | NC_007944 | ATTT | 3 | 8657 | 8668 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_007944 | AATC | 3 | 8745 | 8755 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 9 | NC_007944 | ATTT | 4 | 8848 | 8862 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 10 | NC_007944 | TCTA | 3 | 13526 | 13537 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_007944 | AAAT | 3 | 14147 | 14158 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 12 | NC_007944 | TTTA | 4 | 14776 | 14790 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 13 | NC_007944 | TTTA | 3 | 23456 | 23467 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91208893 |
| 14 | NC_007944 | GATA | 3 | 27290 | 27300 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208894 |
| 15 | NC_007944 | CTAA | 3 | 29130 | 29141 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_007944 | TTTA | 3 | 30311 | 30322 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_007944 | GAAA | 3 | 31518 | 31529 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_007944 | ATCA | 3 | 31713 | 31723 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_007944 | TTCA | 4 | 32585 | 32600 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 20 | NC_007944 | AATA | 3 | 33642 | 33653 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_007944 | TCTT | 3 | 33720 | 33732 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 22 | NC_007944 | GTTT | 3 | 34058 | 34069 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_007944 | GAAA | 3 | 36058 | 36069 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 91208898 |
| 24 | NC_007944 | TTGC | 3 | 36459 | 36469 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 91208898 |
| 25 | NC_007944 | ATCT | 3 | 37478 | 37489 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_007944 | AAAT | 3 | 37542 | 37553 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_007944 | TGAA | 4 | 38098 | 38112 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 28 | NC_007944 | TAAT | 3 | 38431 | 38442 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_007944 | AAAT | 3 | 38461 | 38473 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 30 | NC_007944 | GATC | 3 | 39052 | 39062 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 31 | NC_007944 | AATG | 3 | 42399 | 42410 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91208902 |
| 32 | NC_007944 | ATCT | 4 | 44123 | 44138 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 33 | NC_007944 | GTAA | 3 | 46893 | 46903 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208903 |
| 34 | NC_007944 | TTTG | 3 | 48408 | 48419 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_007944 | AAAG | 3 | 49781 | 49792 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_007944 | CATA | 3 | 51135 | 51145 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_007944 | ACAT | 3 | 51429 | 51439 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_007944 | CAAA | 3 | 52568 | 52579 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 91208906 |
| 39 | NC_007944 | GTCT | 3 | 53179 | 53190 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 91208905 |
| 40 | NC_007944 | GTTT | 3 | 53944 | 53956 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 41 | NC_007944 | GATT | 3 | 53982 | 53993 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_007944 | ATTT | 3 | 54289 | 54299 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_007944 | AATC | 5 | 54317 | 54335 | 19 | 50 % | 25 % | 0 % | 25 % | 10 % | Non-Coding |
| 44 | NC_007944 | AGAA | 3 | 54871 | 54882 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 45 | NC_007944 | AAAG | 3 | 60677 | 60687 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_007944 | ATTT | 3 | 62398 | 62409 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_007944 | TAGT | 3 | 62422 | 62433 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 48 | NC_007944 | TTTA | 3 | 62923 | 62935 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 49 | NC_007944 | TCTA | 3 | 63462 | 63473 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 50 | NC_007944 | TAAA | 3 | 71923 | 71934 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 91208923 |
| 51 | NC_007944 | TCAT | 3 | 73457 | 73468 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 52 | NC_007944 | GAAC | 3 | 73800 | 73811 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 53 | NC_007944 | TTTA | 3 | 74733 | 74744 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91208947 |
| 54 | NC_007944 | TGAA | 3 | 76543 | 76553 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208947 |
| 55 | NC_007944 | TTGA | 3 | 81594 | 81606 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91208947 |
| 56 | NC_007944 | TTTC | 3 | 82529 | 82539 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91208947 |
| 57 | NC_007944 | CTTT | 3 | 84468 | 84478 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91208947 |
| 58 | NC_007944 | TTAA | 3 | 86598 | 86609 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 91208947 |
| 59 | NC_007944 | TTTC | 3 | 86851 | 86862 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 91208947 |
| 60 | NC_007944 | ATTT | 3 | 87197 | 87208 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91208947 |
| 61 | NC_007944 | AATT | 3 | 87697 | 87707 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 91208947 |
| 62 | NC_007944 | TTAT | 3 | 87834 | 87845 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91208947 |
| 63 | NC_007944 | AATT | 3 | 88476 | 88487 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 91208947 |
| 64 | NC_007944 | TTCT | 3 | 92479 | 92489 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91208947 |
| 65 | NC_007944 | ATCG | 3 | 93237 | 93249 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 91208947 |
| 66 | NC_007944 | CTTT | 3 | 93666 | 93676 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91208947 |
| 67 | NC_007944 | TGAT | 3 | 95542 | 95554 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91208947 |
| 68 | NC_007944 | AATA | 3 | 96425 | 96437 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 91208947 |
| 69 | NC_007944 | TCTA | 3 | 108142 | 108153 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 91208960 |
| 70 | NC_007944 | AAGG | 3 | 108291 | 108301 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 91208960 |
| 71 | NC_007944 | GAGG | 3 | 111036 | 111047 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 91208960 |
| 72 | NC_007944 | AGGT | 3 | 111248 | 111259 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 91208960 |
| 73 | NC_007944 | TAAG | 3 | 112368 | 112378 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208960 |
| 74 | NC_007944 | GAGG | 3 | 115149 | 115159 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 91208960 |
| 75 | NC_007944 | TCTT | 3 | 116536 | 116547 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 91208960 |
| 76 | NC_007944 | AGTT | 3 | 117986 | 117996 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 91208960 |
| 77 | NC_007944 | GAAT | 3 | 118144 | 118155 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 91208960 |
| 78 | NC_007944 | ATTA | 3 | 118307 | 118318 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 91208960 |
| 79 | NC_007944 | AAAG | 3 | 124115 | 124126 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 91208960 |
| 80 | NC_007944 | CAAA | 3 | 124935 | 124945 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 91208960 |
| 81 | NC_007944 | ATCA | 3 | 126177 | 126188 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 91208960 |
| 82 | NC_007944 | TCTT | 3 | 128404 | 128414 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91208960 |
| 83 | NC_007944 | ATTT | 3 | 129957 | 129969 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 91208960 |
| 84 | NC_007944 | TGAA | 4 | 130201 | 130216 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 91208960 |
| 85 | NC_007944 | AACA | 3 | 131275 | 131286 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 91208960 |
| 86 | NC_007944 | ATTT | 3 | 132982 | 132992 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 91208960 |
| 87 | NC_007944 | ATTT | 3 | 133961 | 133973 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 91208960 |
| 88 | NC_007944 | CTTA | 3 | 136719 | 136729 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 91208960 |
| 89 | NC_007944 | CCTT | 3 | 140796 | 140806 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 91208960 |
| 90 | NC_007944 | GGAT | 3 | 141340 | 141351 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 91208960 |
| 91 | NC_007944 | AATA | 4 | 145274 | 145289 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 91208960 |
| 92 | NC_007944 | TTTC | 3 | 149902 | 149913 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 93 | NC_007944 | ATCA | 3 | 153585 | 153597 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 91208964 |
| 94 | NC_007944 | TGAT | 3 | 153680 | 153692 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91208964 |
| 95 | NC_007944 | AAAG | 3 | 155421 | 155431 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 91208964 |
| 96 | NC_007944 | CGAT | 3 | 155848 | 155860 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 91208964 |
| 97 | NC_007944 | TATT | 3 | 156480 | 156491 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91208964 |