Tetra-nucleotide Imperfect Repeats of Solanum bulbocastanum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007943 | CCGC | 3 | 73 | 84 | 12 | 0 % | 0 % | 25 % | 75 % | 8 % | Non-Coding |
| 2 | NC_007943 | AAGT | 3 | 1216 | 1226 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208968 |
| 3 | NC_007943 | GATT | 3 | 2539 | 2549 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 91208969 |
| 4 | NC_007943 | GAAA | 3 | 4412 | 4422 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 5 | NC_007943 | AATA | 3 | 4588 | 4598 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_007943 | AATA | 3 | 5903 | 5914 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 91208970 |
| 7 | NC_007943 | GTTT | 3 | 7302 | 7314 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 8 | NC_007943 | TTCT | 3 | 7735 | 7745 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91208971 |
| 9 | NC_007943 | CAAG | 3 | 8825 | 8835 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 10 | NC_007943 | AAAG | 3 | 9430 | 9440 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 11 | NC_007943 | ATGA | 3 | 12351 | 12363 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 91208974 |
| 12 | NC_007943 | GGGA | 3 | 13363 | 13373 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 13 | NC_007943 | TATT | 4 | 14434 | 14448 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 14 | NC_007943 | GTAA | 3 | 14795 | 14807 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 15 | NC_007943 | TATT | 3 | 15826 | 15838 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 16 | NC_007943 | AAAC | 3 | 18638 | 18648 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 91208978 |
| 17 | NC_007943 | GAAT | 3 | 19226 | 19236 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91208978 |
| 18 | NC_007943 | GTTT | 3 | 23745 | 23756 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 91208979 |
| 19 | NC_007943 | CTAT | 3 | 30234 | 30245 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 20 | NC_007943 | TTAA | 3 | 30363 | 30373 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 91208982 |
| 21 | NC_007943 | TTTA | 3 | 30718 | 30729 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 22 | NC_007943 | TCAA | 3 | 32003 | 32013 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 23 | NC_007943 | ATTT | 3 | 32934 | 32944 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_007943 | TATT | 3 | 33151 | 33162 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 25 | NC_007943 | TATC | 3 | 34744 | 34755 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 91208984 |
| 26 | NC_007943 | CTTT | 3 | 36123 | 36133 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_007943 | ATTG | 3 | 39335 | 39345 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 91208987 |
| 28 | NC_007943 | AATG | 3 | 40981 | 40992 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91208988 |
| 29 | NC_007943 | CTAT | 3 | 42720 | 42731 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 30 | NC_007943 | TTTA | 3 | 42736 | 42747 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_007943 | TAAA | 4 | 43292 | 43307 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 32 | NC_007943 | TTTC | 4 | 44226 | 44241 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 91208989 |
| 33 | NC_007943 | TATT | 4 | 47242 | 47256 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 34 | NC_007943 | AAGG | 3 | 47468 | 47478 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 35 | NC_007943 | TGAT | 3 | 56481 | 56492 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_007943 | AATA | 4 | 65448 | 65462 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 37 | NC_007943 | CAAA | 3 | 65788 | 65799 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 38 | NC_007943 | TTTC | 3 | 66840 | 66850 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 39 | NC_007943 | AAAT | 3 | 68630 | 68641 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_007943 | AAAT | 3 | 69729 | 69740 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_007943 | AAAC | 3 | 69824 | 69835 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 42 | NC_007943 | GAAA | 3 | 70235 | 70246 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_007943 | TGAA | 3 | 70743 | 70754 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 44 | NC_007943 | GGTT | 3 | 75265 | 75276 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 91209035 |
| 45 | NC_007943 | CTTT | 3 | 81728 | 81739 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 91209035 |
| 46 | NC_007943 | TTTA | 3 | 82240 | 82251 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91209035 |
| 47 | NC_007943 | ACTT | 3 | 83770 | 83780 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 91209035 |
| 48 | NC_007943 | CAAT | 3 | 84484 | 84494 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 91209035 |
| 49 | NC_007943 | GAAA | 3 | 89638 | 89650 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 91209035 |
| 50 | NC_007943 | AATA | 3 | 93424 | 93436 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 91209035 |
| 51 | NC_007943 | ATCC | 3 | 103946 | 103957 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 91209048 |
| 52 | NC_007943 | AAGG | 3 | 104254 | 104264 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 91209048 |
| 53 | NC_007943 | GAGG | 3 | 106980 | 106991 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 91209048 |
| 54 | NC_007943 | AGGT | 3 | 107192 | 107203 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 91209048 |
| 55 | NC_007943 | TAAG | 3 | 108312 | 108322 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 91209048 |
| 56 | NC_007943 | GGAA | 3 | 110405 | 110415 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 91209048 |
| 57 | NC_007943 | AAAT | 3 | 112929 | 112939 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 91209048 |
| 58 | NC_007943 | AAAT | 3 | 115173 | 115183 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 91209048 |
| 59 | NC_007943 | GAAA | 3 | 116889 | 116900 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 91209048 |
| 60 | NC_007943 | ATGA | 3 | 118779 | 118790 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91209048 |
| 61 | NC_007943 | TTGA | 3 | 118971 | 118982 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 91209048 |
| 62 | NC_007943 | AAAG | 3 | 121989 | 121999 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 91209048 |
| 63 | NC_007943 | ATTT | 3 | 122064 | 122075 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91209048 |
| 64 | NC_007943 | TAGA | 3 | 122917 | 122928 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 91209048 |
| 65 | NC_007943 | AGGT | 3 | 124988 | 124998 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 91209048 |
| 66 | NC_007943 | AATT | 3 | 125342 | 125354 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 91209048 |
| 67 | NC_007943 | TTTA | 3 | 126146 | 126157 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 91209048 |
| 68 | NC_007943 | AAAG | 3 | 128597 | 128607 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 91209048 |
| 69 | NC_007943 | CTTT | 3 | 129461 | 129471 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 91209048 |
| 70 | NC_007943 | TTCC | 3 | 130713 | 130723 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 91209048 |
| 71 | NC_007943 | CTTA | 3 | 132806 | 132816 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 91209048 |
| 72 | NC_007943 | CCTT | 3 | 136864 | 136874 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 91209048 |
| 73 | NC_007943 | GGAT | 3 | 137171 | 137182 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 91209048 |
| 74 | NC_007943 | TATT | 3 | 147692 | 147704 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 91209052 |
| 75 | NC_007943 | TGAT | 3 | 148694 | 148706 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 91209052 |
| 76 | NC_007943 | GATC | 3 | 148721 | 148731 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 91209052 |