Penta-nucleotide Imperfect Repeats of Oryza sativa Indica Group mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007886 | GCCTA | 3 | 11830 | 11844 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | 89280739 |
| 2 | NC_007886 | TAATT | 3 | 19948 | 19962 | 15 | 40 % | 60 % | 0 % | 0 % | 0 % | 89280739 |
| 3 | NC_007886 | ATTCT | 3 | 32863 | 32876 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 89280739 |
| 4 | NC_007886 | CAAGA | 3 | 55380 | 55393 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | 89280739 |
| 5 | NC_007886 | AAAAG | 3 | 65317 | 65331 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 89280739 |
| 6 | NC_007886 | GTGGT | 3 | 73079 | 73092 | 14 | 0 % | 40 % | 60 % | 0 % | 7 % | 89280739 |
| 7 | NC_007886 | CCTAT | 3 | 83315 | 83328 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 89280739 |
| 8 | NC_007886 | GCCTA | 3 | 106890 | 106904 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | 89280739 |
| 9 | NC_007886 | TAATT | 3 | 115008 | 115022 | 15 | 40 % | 60 % | 0 % | 0 % | 0 % | 89280739 |
| 10 | NC_007886 | ATTCT | 3 | 127923 | 127936 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 89280739 |
| 11 | NC_007886 | ATACG | 3 | 145629 | 145642 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | 89280739 |
| 12 | NC_007886 | GGCTT | 4 | 151539 | 151558 | 20 | 0 % | 40 % | 40 % | 20 % | 5 % | 89280739 |
| 13 | NC_007886 | CCCAT | 3 | 152681 | 152694 | 14 | 20 % | 20 % | 0 % | 60 % | 7 % | 89280739 |
| 14 | NC_007886 | TCAAT | 3 | 153617 | 153630 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 89280739 |
| 15 | NC_007886 | GGTAA | 3 | 174810 | 174825 | 16 | 40 % | 20 % | 40 % | 0 % | 6 % | 89280739 |
| 16 | NC_007886 | CAATT | 3 | 179903 | 179917 | 15 | 40 % | 40 % | 0 % | 20 % | 0 % | 89280739 |
| 17 | NC_007886 | TTTAG | 3 | 181190 | 181203 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 89280739 |
| 18 | NC_007886 | CTGAT | 3 | 202097 | 202111 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | 89280739 |
| 19 | NC_007886 | CTTTT | 3 | 222226 | 222239 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 89280739 |
| 20 | NC_007886 | AAAGA | 3 | 232807 | 232820 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 89280739 |
| 21 | NC_007886 | AAAAG | 3 | 234163 | 234177 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 89280739 |
| 22 | NC_007886 | CATTT | 3 | 248491 | 248505 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 89280739 |
| 23 | NC_007886 | AAAGG | 3 | 248604 | 248618 | 15 | 60 % | 0 % | 40 % | 0 % | 0 % | 89280739 |
| 24 | NC_007886 | CTTTG | 3 | 252967 | 252981 | 15 | 0 % | 60 % | 20 % | 20 % | 6 % | 89280739 |
| 25 | NC_007886 | CTTTT | 3 | 281346 | 281359 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 89280739 |
| 26 | NC_007886 | AATTT | 3 | 307203 | 307216 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 89280739 |
| 27 | NC_007886 | CGAGT | 3 | 308864 | 308878 | 15 | 20 % | 20 % | 40 % | 20 % | 6 % | 89280739 |
| 28 | NC_007886 | ATCCA | 3 | 312976 | 312990 | 15 | 40 % | 20 % | 0 % | 40 % | 0 % | 89280739 |
| 29 | NC_007886 | TTCCC | 3 | 350319 | 350333 | 15 | 0 % | 40 % | 0 % | 60 % | 6 % | Non-Coding |
| 30 | NC_007886 | TTTTC | 3 | 359751 | 359764 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
| 31 | NC_007886 | CGGGC | 3 | 366534 | 366548 | 15 | 0 % | 0 % | 60 % | 40 % | 0 % | Non-Coding |
| 32 | NC_007886 | CTTTC | 3 | 375014 | 375027 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
| 33 | NC_007886 | TACCT | 3 | 376392 | 376405 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
| 34 | NC_007886 | ATTTT | 3 | 384920 | 384934 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 89280742 |
| 35 | NC_007886 | TAGGC | 3 | 400829 | 400843 | 15 | 20 % | 20 % | 40 % | 20 % | 6 % | Non-Coding |
| 36 | NC_007886 | CTTTT | 3 | 412302 | 412315 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 89280754 |
| 37 | NC_007886 | TAGAA | 3 | 418625 | 418639 | 15 | 60 % | 20 % | 20 % | 0 % | 0 % | 89280754 |
| 38 | NC_007886 | CATTC | 3 | 420050 | 420063 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 89280754 |
| 39 | NC_007886 | TTCCC | 3 | 431432 | 431446 | 15 | 0 % | 40 % | 0 % | 60 % | 6 % | 89280754 |
| 40 | NC_007886 | TTTTC | 3 | 440864 | 440877 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 89280754 |
| 41 | NC_007886 | CGGGC | 3 | 447647 | 447661 | 15 | 0 % | 0 % | 60 % | 40 % | 0 % | 89280754 |
| 42 | NC_007886 | CTTTC | 3 | 456127 | 456140 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
| 43 | NC_007886 | TACCT | 3 | 457505 | 457518 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
| 44 | NC_007886 | ATTTT | 3 | 466033 | 466047 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
| 45 | NC_007886 | ATACG | 3 | 468649 | 468662 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | Non-Coding |
| 46 | NC_007886 | GGCTT | 4 | 474559 | 474578 | 20 | 0 % | 40 % | 40 % | 20 % | 5 % | Non-Coding |
| 47 | NC_007886 | CCCAT | 3 | 475701 | 475714 | 14 | 20 % | 20 % | 0 % | 60 % | 7 % | Non-Coding |
| 48 | NC_007886 | TCAAT | 3 | 476637 | 476650 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |