Tetra-nucleotide Imperfect Repeats of Lactuca sativa chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007578 | AAGT | 3 | 1178 | 1188 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 81176230 |
| 2 | NC_007578 | AGAA | 3 | 1984 | 1996 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 3 | NC_007578 | GATG | 3 | 4282 | 4294 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
| 4 | NC_007578 | AAAT | 3 | 4509 | 4519 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_007578 | AAAG | 3 | 4532 | 4543 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_007578 | TTCT | 3 | 7828 | 7838 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 81176233 |
| 7 | NC_007578 | TTTA | 3 | 10449 | 10459 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_007578 | ATTT | 3 | 10488 | 10499 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_007578 | TTCT | 3 | 11243 | 11255 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 10 | NC_007578 | AATA | 3 | 12540 | 12550 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_007578 | ATTC | 3 | 17106 | 17116 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 81176238 |
| 12 | NC_007578 | AACA | 3 | 23889 | 23899 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 81176240 |
| 13 | NC_007578 | ACTT | 3 | 24562 | 24572 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 81176241 |
| 14 | NC_007578 | TTAC | 3 | 29662 | 29673 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 81176244 |
| 15 | NC_007578 | AATG | 3 | 30114 | 30124 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 16 | NC_007578 | TGGG | 3 | 33753 | 33763 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 81176246 |
| 17 | NC_007578 | GAAA | 3 | 33917 | 33928 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 81176246 |
| 18 | NC_007578 | TGTA | 3 | 35454 | 35464 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 19 | NC_007578 | GATC | 3 | 36493 | 36503 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 20 | NC_007578 | AATG | 3 | 39838 | 39849 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 81176250 |
| 21 | NC_007578 | TATT | 3 | 41889 | 41899 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 22 | NC_007578 | GAAA | 3 | 41932 | 41943 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_007578 | CTTT | 3 | 43042 | 43052 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_007578 | ATAA | 4 | 54824 | 54839 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 25 | NC_007578 | TGAT | 3 | 56924 | 56936 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 26 | NC_007578 | TGAT | 3 | 58722 | 58732 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 27 | NC_007578 | TCAG | 3 | 60146 | 60157 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 81176261 |
| 28 | NC_007578 | ATAA | 3 | 63078 | 63088 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_007578 | TTTG | 3 | 64143 | 64154 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 81176265 |
| 30 | NC_007578 | ATCT | 3 | 67366 | 67377 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_007578 | TATT | 3 | 67839 | 67850 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_007578 | ATTT | 3 | 68349 | 68360 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_007578 | TGAA | 3 | 68844 | 68855 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_007578 | TTTC | 3 | 68878 | 68890 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 35 | NC_007578 | TTTC | 3 | 70122 | 70133 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 81176275 |
| 36 | NC_007578 | AAGA | 3 | 70174 | 70185 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 81176275 |
| 37 | NC_007578 | TTTA | 3 | 70361 | 70372 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 81176275 |
| 38 | NC_007578 | CTTT | 3 | 72344 | 72354 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 81176275 |
| 39 | NC_007578 | GGTT | 3 | 73382 | 73393 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 81176275 |
| 40 | NC_007578 | TAAA | 3 | 74173 | 74183 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 81176275 |
| 41 | NC_007578 | TTTC | 3 | 75070 | 75080 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 81176275 |
| 42 | NC_007578 | AAGT | 3 | 75487 | 75497 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 81176275 |
| 43 | NC_007578 | AATC | 4 | 78167 | 78182 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 81176275 |
| 44 | NC_007578 | TTCT | 3 | 82283 | 82294 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 81176275 |
| 45 | NC_007578 | TTAT | 3 | 82478 | 82489 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 81176275 |
| 46 | NC_007578 | TTAT | 3 | 83243 | 83254 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 81176275 |
| 47 | NC_007578 | AATA | 3 | 91662 | 91674 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 81176275 |
| 48 | NC_007578 | CCCT | 3 | 97896 | 97906 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 81176275 |
| 49 | NC_007578 | ATCC | 3 | 102283 | 102294 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 81176274 |
| 50 | NC_007578 | TCTA | 3 | 102677 | 102688 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 81176274 |
| 51 | NC_007578 | AAGG | 3 | 102816 | 102826 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 81176274 |
| 52 | NC_007578 | GAGG | 3 | 105544 | 105555 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 81176274 |
| 53 | NC_007578 | AGGT | 3 | 105756 | 105767 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 81176274 |
| 54 | NC_007578 | TAAG | 3 | 106876 | 106886 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 81176274 |
| 55 | NC_007578 | AAAT | 3 | 110695 | 110705 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 81176274 |
| 56 | NC_007578 | ATTT | 3 | 112700 | 112710 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 81176274 |
| 57 | NC_007578 | AAGA | 3 | 114184 | 114195 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 81176274 |
| 58 | NC_007578 | TTTA | 3 | 114742 | 114754 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 81176274 |
| 59 | NC_007578 | GAAT | 3 | 120430 | 120440 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 81176274 |
| 60 | NC_007578 | ACTT | 3 | 122544 | 122554 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 81176274 |
| 61 | NC_007578 | AATT | 3 | 123142 | 123154 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 81176274 |
| 62 | NC_007578 | TTTC | 3 | 124400 | 124411 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 81176274 |
| 63 | NC_007578 | TTTA | 3 | 125554 | 125565 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 81176274 |
| 64 | NC_007578 | AATT | 3 | 128681 | 128691 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 81176274 |
| 65 | NC_007578 | ATAA | 4 | 128930 | 128944 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 81176274 |
| 66 | NC_007578 | CTTA | 3 | 129983 | 129993 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 81176274 |
| 67 | NC_007578 | CCTT | 3 | 134043 | 134053 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 81176274 |
| 68 | NC_007578 | GGAT | 3 | 134575 | 134586 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 81176274 |
| 69 | NC_007578 | TATT | 3 | 145195 | 145207 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 81176311 |
| 70 | NC_007578 | TGAT | 3 | 146176 | 146188 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 81176311 |
| 71 | NC_007578 | ATTT | 3 | 148902 | 148913 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 81176311 |