Tetra-nucleotide Imperfect Repeats of Nicotiana sylvestris chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007500 | TAAA | 3 | 426 | 437 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_007500 | AAGA | 3 | 438 | 449 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_007500 | AAGT | 3 | 1235 | 1245 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 78102510 |
| 4 | NC_007500 | CATT | 3 | 4149 | 4160 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_007500 | TTTC | 3 | 5491 | 5501 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 78102512 |
| 6 | NC_007500 | AATA | 3 | 6001 | 6012 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 78102512 |
| 7 | NC_007500 | TTAC | 3 | 7759 | 7771 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 8 | NC_007500 | CAAG | 3 | 9072 | 9082 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 9 | NC_007500 | ATGA | 3 | 12743 | 12755 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 78102517 |
| 10 | NC_007500 | AAAT | 3 | 12839 | 12849 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 78102517 |
| 11 | NC_007500 | AAAT | 3 | 13561 | 13571 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_007500 | TATT | 3 | 16204 | 16216 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 13 | NC_007500 | AAAC | 3 | 19015 | 19025 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 126165910 |
| 14 | NC_007500 | GAAT | 3 | 19603 | 19613 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 126165910 |
| 15 | NC_007500 | GTTT | 3 | 24128 | 24139 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 78102522 |
| 16 | NC_007500 | TTCA | 3 | 27552 | 27562 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_007500 | CTAT | 3 | 30627 | 30638 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 18 | NC_007500 | TTAA | 3 | 30756 | 30766 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 78102526 |
| 19 | NC_007500 | TTTA | 3 | 31111 | 31122 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 20 | NC_007500 | TTCT | 3 | 32822 | 32832 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_007500 | AAAG | 3 | 32972 | 32983 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 22 | NC_007500 | TGAA | 3 | 33418 | 33428 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 23 | NC_007500 | CTTT | 3 | 36998 | 37008 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_007500 | AAAT | 3 | 37390 | 37400 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 78102529 |
| 25 | NC_007500 | TATT | 3 | 38160 | 38171 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 26 | NC_007500 | AATG | 3 | 41873 | 41884 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 78102533 |
| 27 | NC_007500 | TTTA | 3 | 43628 | 43639 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_007500 | AAGG | 3 | 48426 | 48436 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 29 | NC_007500 | TCTT | 3 | 53069 | 53079 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_007500 | TTAT | 3 | 59455 | 59466 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_007500 | TTTA | 3 | 59532 | 59543 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_007500 | TAAA | 3 | 59626 | 59638 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 33 | NC_007500 | AATA | 4 | 65980 | 65994 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 34 | NC_007500 | CAAA | 3 | 66296 | 66307 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 78102550 |
| 35 | NC_007500 | TTTC | 3 | 67341 | 67351 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 78102555 |
| 36 | NC_007500 | AAAT | 3 | 69319 | 69330 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_007500 | AAAT | 3 | 70413 | 70424 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 38 | NC_007500 | AAAC | 3 | 70508 | 70519 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 39 | NC_007500 | TGAA | 3 | 71413 | 71424 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_007500 | TTCC | 3 | 72122 | 72132 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 41 | NC_007500 | GGTT | 3 | 75964 | 75975 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 78102589 |
| 42 | NC_007500 | CTTT | 3 | 82548 | 82558 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 78102589 |
| 43 | NC_007500 | ACTT | 3 | 84592 | 84602 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 78102589 |
| 44 | NC_007500 | CAAT | 3 | 85310 | 85320 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 78102589 |
| 45 | NC_007500 | AATA | 3 | 94265 | 94277 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 78102589 |
| 46 | NC_007500 | ATCC | 3 | 104854 | 104865 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 78102562 |
| 47 | NC_007500 | AAGG | 3 | 105147 | 105157 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 78102562 |
| 48 | NC_007500 | GAGG | 3 | 107771 | 107782 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 78102562 |
| 49 | NC_007500 | AGGT | 3 | 107983 | 107994 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 78102562 |
| 50 | NC_007500 | TAAG | 3 | 109103 | 109113 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 78102562 |
| 51 | NC_007500 | GGAA | 3 | 111181 | 111191 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 78102562 |
| 52 | NC_007500 | GTTT | 3 | 112881 | 112891 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 78102562 |
| 53 | NC_007500 | AAAT | 3 | 113618 | 113628 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 78102562 |
| 54 | NC_007500 | GAAA | 3 | 117575 | 117586 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 78102562 |
| 55 | NC_007500 | ATGA | 3 | 119474 | 119485 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 78102562 |
| 56 | NC_007500 | TTGA | 3 | 119667 | 119678 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 78102562 |
| 57 | NC_007500 | AAAG | 3 | 122680 | 122690 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 78102562 |
| 58 | NC_007500 | AATT | 3 | 126022 | 126034 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 78102562 |
| 59 | NC_007500 | TTTA | 3 | 126832 | 126843 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 78102562 |
| 60 | NC_007500 | AAAG | 4 | 129283 | 129297 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 78102562 |
| 61 | NC_007500 | TTCT | 3 | 129731 | 129741 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 78102562 |
| 62 | NC_007500 | CTTT | 3 | 130183 | 130193 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 78102562 |
| 63 | NC_007500 | TTCC | 3 | 131435 | 131445 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 78102562 |
| 64 | NC_007500 | CTTA | 3 | 133513 | 133523 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 78102562 |
| 65 | NC_007500 | CCTT | 3 | 137469 | 137479 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 78102562 |
| 66 | NC_007500 | GGAT | 3 | 137761 | 137772 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 78102562 |
| 67 | NC_007500 | TATT | 3 | 148349 | 148361 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 78102617 |
| 68 | NC_007500 | TGAT | 3 | 149351 | 149363 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 78102617 |
| 69 | NC_007500 | GATC | 3 | 149378 | 149388 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 78102617 |
| 70 | NC_007500 | ATTT | 3 | 152131 | 152142 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 78102617 |