Tetra-nucleotide Imperfect Repeats of Acorus calamus plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007407 | CATT | 4 | 112 | 126 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 2 | NC_007407 | AAGT | 3 | 1163 | 1173 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 75755639 |
| 3 | NC_007407 | GAAA | 3 | 2927 | 2937 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 75755640 |
| 4 | NC_007407 | CCTT | 3 | 5368 | 5378 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 75755641 |
| 5 | NC_007407 | TTTA | 3 | 5642 | 5653 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 75755641 |
| 6 | NC_007407 | GAAA | 3 | 6277 | 6287 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 7 | NC_007407 | TATT | 4 | 6449 | 6464 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_007407 | AGAA | 3 | 6790 | 6800 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 9 | NC_007407 | CATT | 3 | 7520 | 7530 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_007407 | TCAT | 3 | 8671 | 8682 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_007407 | AGCA | 3 | 13447 | 13462 | 16 | 50 % | 0 % | 25 % | 25 % | 6 % | Non-Coding |
| 12 | NC_007407 | GTTT | 3 | 14109 | 14120 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_007407 | ATTC | 3 | 14127 | 14138 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_007407 | TACA | 3 | 14528 | 14539 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_007407 | TCAA | 3 | 16910 | 16921 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 126022801 |
| 16 | NC_007407 | TTCA | 3 | 22801 | 22812 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 75755650 |
| 17 | NC_007407 | GAAT | 3 | 22911 | 22921 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 75755650 |
| 18 | NC_007407 | GAAA | 3 | 27063 | 27073 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 75755651 |
| 19 | NC_007407 | TCTT | 3 | 31458 | 31468 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_007407 | TGTA | 3 | 31803 | 31814 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_007407 | GAAA | 3 | 34780 | 34791 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 75755655 |
| 22 | NC_007407 | AATG | 3 | 40660 | 40671 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 75755659 |
| 23 | NC_007407 | GATA | 3 | 42345 | 42356 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 24 | NC_007407 | TTTA | 3 | 42403 | 42414 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_007407 | TTTC | 3 | 43743 | 43754 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 75755660 |
| 26 | NC_007407 | GTAA | 3 | 44757 | 44767 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 75755660 |
| 27 | NC_007407 | TTTA | 3 | 45572 | 45582 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_007407 | TTGA | 3 | 47893 | 47905 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 29 | NC_007407 | TTAA | 3 | 51339 | 51350 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_007407 | AGTG | 3 | 51444 | 51454 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
| 31 | NC_007407 | TCAA | 3 | 55981 | 55993 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 32 | NC_007407 | TGCA | 3 | 57598 | 57610 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 75755667 |
| 33 | NC_007407 | TTGT | 3 | 58403 | 58413 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_007407 | TTTG | 3 | 64065 | 64076 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 75755673 |
| 35 | NC_007407 | AAAT | 3 | 65373 | 65385 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 36 | NC_007407 | TATT | 3 | 65664 | 65674 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 37 | NC_007407 | AGAA | 3 | 66681 | 66692 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 38 | NC_007407 | GAAA | 3 | 67599 | 67610 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 75755679 |
| 39 | NC_007407 | TGAA | 3 | 67709 | 67721 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 40 | NC_007407 | AAGA | 3 | 68163 | 68174 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 41 | NC_007407 | ATTC | 3 | 68216 | 68227 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 42 | NC_007407 | TTTC | 3 | 68715 | 68727 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 43 | NC_007407 | TTCC | 3 | 70129 | 70141 | 13 | 0 % | 50 % | 0 % | 50 % | 7 % | 75755683 |
| 44 | NC_007407 | TTTA | 3 | 70251 | 70262 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 75755683 |
| 45 | NC_007407 | AAGA | 3 | 70680 | 70691 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 75755683 |
| 46 | NC_007407 | GAAA | 3 | 80850 | 80861 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 75755683 |
| 47 | NC_007407 | TATT | 3 | 81582 | 81594 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 75755683 |
| 48 | NC_007407 | TATT | 3 | 83191 | 83201 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 75755683 |
| 49 | NC_007407 | AATG | 4 | 84024 | 84038 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | 75755683 |
| 50 | NC_007407 | TCAA | 3 | 85059 | 85070 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 75755683 |
| 51 | NC_007407 | TTCT | 3 | 87511 | 87521 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 75755683 |
| 52 | NC_007407 | ATCC | 3 | 101946 | 101957 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 75755682 |
| 53 | NC_007407 | TCTA | 3 | 102335 | 102346 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 75755682 |
| 54 | NC_007407 | GAGG | 3 | 105191 | 105202 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 75755682 |
| 55 | NC_007407 | AGGT | 3 | 105403 | 105414 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 75755682 |
| 56 | NC_007407 | TAAG | 3 | 106524 | 106534 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 75755682 |
| 57 | NC_007407 | AACC | 3 | 107003 | 107015 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 75755682 |
| 58 | NC_007407 | AAAG | 3 | 108441 | 108452 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 75755682 |
| 59 | NC_007407 | ATTT | 3 | 108553 | 108564 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 75755682 |
| 60 | NC_007407 | GGAA | 3 | 108755 | 108765 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 75755682 |
| 61 | NC_007407 | AAAT | 3 | 110043 | 110053 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 75755682 |
| 62 | NC_007407 | CGAA | 3 | 110337 | 110348 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 75755682 |
| 63 | NC_007407 | CTAT | 3 | 112420 | 112430 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 75755682 |
| 64 | NC_007407 | CTAT | 3 | 112971 | 112981 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 75755682 |
| 65 | NC_007407 | ATTC | 3 | 114046 | 114057 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 75755682 |
| 66 | NC_007407 | CGAT | 3 | 117648 | 117659 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 75755682 |
| 67 | NC_007407 | AAAT | 3 | 120251 | 120261 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 75755682 |
| 68 | NC_007407 | ATGA | 3 | 120415 | 120425 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 75755682 |
| 69 | NC_007407 | AGCC | 3 | 123059 | 123069 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | 75755682 |
| 70 | NC_007407 | TGTT | 3 | 124619 | 124629 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 75755682 |
| 71 | NC_007407 | TTTC | 4 | 125753 | 125768 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 75755682 |
| 72 | NC_007407 | TTTC | 3 | 126493 | 126504 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 75755682 |
| 73 | NC_007407 | TTCC | 3 | 129206 | 129216 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 75755682 |
| 74 | NC_007407 | AAAT | 3 | 129407 | 129418 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 75755682 |
| 75 | NC_007407 | GGTT | 3 | 130956 | 130968 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 75755682 |
| 76 | NC_007407 | CTTA | 3 | 131437 | 131447 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 75755682 |
| 77 | NC_007407 | GGAT | 3 | 136014 | 136025 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 75755682 |
| 78 | NC_007407 | GTAA | 3 | 150291 | 150302 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 126022805 |
| 79 | NC_007407 | ATTT | 3 | 150323 | 150334 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 126022805 |