Penta-nucleotide Imperfect Repeats of Cucumis sativus chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_007144 | TCTCT | 3 | 5242 | 5255 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 68164785 |
2 | NC_007144 | AAAAT | 3 | 13280 | 13294 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 68164789 |
3 | NC_007144 | TTTCT | 3 | 13367 | 13381 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 68164789 |
4 | NC_007144 | TATTT | 3 | 14023 | 14036 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_007144 | ATAAG | 3 | 34474 | 34488 | 15 | 60 % | 20 % | 20 % | 0 % | 0 % | Non-Coding |
6 | NC_007144 | TTATT | 3 | 48311 | 48325 | 15 | 20 % | 80 % | 0 % | 0 % | 0 % | Non-Coding |
7 | NC_007144 | TACAA | 3 | 53799 | 53812 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | Non-Coding |
8 | NC_007144 | AAATT | 3 | 67437 | 67451 | 15 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_007144 | TTTTC | 3 | 70004 | 70017 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
10 | NC_007144 | CGAAT | 3 | 74491 | 74505 | 15 | 40 % | 20 % | 20 % | 20 % | 6 % | 68164827 |
11 | NC_007144 | AAATA | 3 | 80001 | 80014 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 68164827 |
12 | NC_007144 | ATATG | 3 | 88555 | 88569 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 68164827 |
13 | NC_007144 | GATCA | 3 | 91799 | 91812 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | 68164827 |
14 | NC_007144 | ATGAA | 3 | 94787 | 94801 | 15 | 60 % | 20 % | 20 % | 0 % | 0 % | 68164827 |
15 | NC_007144 | CTAAA | 3 | 111878 | 111891 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | 68164828 |
16 | NC_007144 | GAAAT | 3 | 115577 | 115590 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 68164828 |
17 | NC_007144 | TTTTC | 3 | 125029 | 125042 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 68164828 |
18 | NC_007144 | TTTTA | 3 | 125108 | 125121 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 68164828 |
19 | NC_007144 | AAGAA | 3 | 128882 | 128896 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 68164828 |
20 | NC_007144 | TTTCA | 3 | 147110 | 147124 | 15 | 20 % | 60 % | 0 % | 20 % | 0 % | 68164865 |
21 | NC_007144 | TGATC | 3 | 150094 | 150107 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | 68164865 |