Tetra-nucleotide Imperfect Repeats of Cucumis sativus chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_007144 | AAGT | 3 | 930 | 940 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 68164783 |
| 2 | NC_007144 | AATT | 3 | 1789 | 1800 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_007144 | GAAA | 3 | 4685 | 4695 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 4 | NC_007144 | ATTC | 3 | 5623 | 5633 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 68164785 |
| 5 | NC_007144 | TTCT | 3 | 8044 | 8054 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 68164786 |
| 6 | NC_007144 | ATTT | 3 | 9295 | 9305 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_007144 | GTTA | 3 | 9395 | 9406 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_007144 | AATT | 3 | 10283 | 10294 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 9 | NC_007144 | AATT | 3 | 10895 | 10906 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_007144 | TACG | 3 | 11235 | 11246 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 68164788 |
| 11 | NC_007144 | TTCT | 3 | 18739 | 18750 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 126165906 |
| 12 | NC_007144 | TGAA | 3 | 19814 | 19824 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 126165906 |
| 13 | NC_007144 | TATT | 4 | 23923 | 23937 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | 270039012 |
| 14 | NC_007144 | ATTT | 3 | 27799 | 27811 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 68164795 |
| 15 | NC_007144 | CTTT | 3 | 30084 | 30095 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_007144 | ATTT | 3 | 32842 | 32853 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_007144 | TTTA | 3 | 32970 | 32981 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 18 | NC_007144 | AAAT | 3 | 33099 | 33109 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 19 | NC_007144 | ATGT | 3 | 33389 | 33400 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_007144 | GAAA | 3 | 36279 | 36290 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 68164799 |
| 21 | NC_007144 | AAGT | 3 | 37782 | 37792 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_007144 | TAAT | 3 | 38787 | 38798 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 23 | NC_007144 | TAAT | 3 | 38803 | 38814 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 24 | NC_007144 | TTAA | 3 | 44662 | 44672 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_007144 | ATTT | 3 | 46444 | 46455 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 68164804 |
| 26 | NC_007144 | ATTT | 3 | 52033 | 52043 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_007144 | GTCT | 3 | 52593 | 52604 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 68164807 |
| 28 | NC_007144 | TTTC | 3 | 57233 | 57243 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 29 | NC_007144 | TAAA | 3 | 63375 | 63385 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_007144 | ACTG | 3 | 64073 | 64084 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 68164815 |
| 31 | NC_007144 | AAAG | 3 | 64660 | 64671 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 68164816 |
| 32 | NC_007144 | TTCT | 3 | 65972 | 65983 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 33 | NC_007144 | CTTT | 3 | 67744 | 67754 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 34 | NC_007144 | TTAA | 3 | 70773 | 70785 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 35 | NC_007144 | TGAA | 3 | 71390 | 71401 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_007144 | TTTC | 3 | 71424 | 71436 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 37 | NC_007144 | TGAA | 3 | 74376 | 74386 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 68164827 |
| 38 | NC_007144 | TTCT | 3 | 77373 | 77385 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 68164827 |
| 39 | NC_007144 | CATG | 3 | 78947 | 78959 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 68164827 |
| 40 | NC_007144 | TTTC | 3 | 80386 | 80396 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 68164827 |
| 41 | NC_007144 | TAAA | 3 | 84971 | 84982 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 68164827 |
| 42 | NC_007144 | ATTT | 3 | 85064 | 85074 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 68164827 |
| 43 | NC_007144 | TTAA | 3 | 86367 | 86377 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 68164827 |
| 44 | NC_007144 | TTCT | 3 | 89433 | 89443 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 68164827 |
| 45 | NC_007144 | ATTT | 5 | 89715 | 89735 | 21 | 25 % | 75 % | 0 % | 0 % | 9 % | 68164827 |
| 46 | NC_007144 | TTGT | 3 | 90572 | 90583 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 68164827 |
| 47 | NC_007144 | CTTT | 3 | 90617 | 90627 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 68164827 |
| 48 | NC_007144 | TGAT | 3 | 92427 | 92439 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 68164827 |
| 49 | NC_007144 | TGAT | 3 | 92469 | 92481 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 68164827 |
| 50 | NC_007144 | TCAC | 3 | 92732 | 92743 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 68164827 |
| 51 | NC_007144 | ATCC | 3 | 104321 | 104332 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 68164828 |
| 52 | NC_007144 | AAGG | 3 | 104723 | 104733 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 68164828 |
| 53 | NC_007144 | GAGG | 3 | 107448 | 107459 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 68164828 |
| 54 | NC_007144 | AGGT | 3 | 107660 | 107671 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 68164828 |
| 55 | NC_007144 | TAAG | 3 | 108780 | 108790 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 68164828 |
| 56 | NC_007144 | GGAA | 3 | 110939 | 110949 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 68164828 |
| 57 | NC_007144 | CAAA | 3 | 111844 | 111854 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 68164828 |
| 58 | NC_007144 | AGTA | 3 | 112728 | 112739 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 68164828 |
| 59 | NC_007144 | TTTA | 3 | 114351 | 114361 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 68164828 |
| 60 | NC_007144 | TTTG | 3 | 114522 | 114532 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 68164828 |
| 61 | NC_007144 | TAAA | 4 | 114982 | 114998 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | 68164828 |
| 62 | NC_007144 | ATAA | 6 | 115000 | 115024 | 25 | 75 % | 25 % | 0 % | 0 % | 8 % | 68164828 |
| 63 | NC_007144 | ATTT | 3 | 117048 | 117059 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 68164828 |
| 64 | NC_007144 | AAGA | 3 | 117065 | 117075 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 68164828 |
| 65 | NC_007144 | ATAA | 5 | 119285 | 119304 | 20 | 75 % | 25 % | 0 % | 0 % | 5 % | 68164828 |
| 66 | NC_007144 | ATTT | 3 | 120707 | 120718 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 68164828 |
| 67 | NC_007144 | CCCA | 3 | 121559 | 121570 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 68164828 |
| 68 | NC_007144 | AATA | 3 | 122305 | 122315 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 68164828 |
| 69 | NC_007144 | AATT | 4 | 124837 | 124852 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 68164828 |
| 70 | NC_007144 | TTTG | 3 | 127113 | 127123 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 68164828 |
| 71 | NC_007144 | TAAT | 3 | 127124 | 127135 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 68164828 |
| 72 | NC_007144 | TTTC | 3 | 128505 | 128515 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 68164828 |
| 73 | NC_007144 | TTCC | 3 | 130959 | 130969 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 68164828 |
| 74 | NC_007144 | CTTA | 3 | 133116 | 133126 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 68164828 |
| 75 | NC_007144 | CCTT | 3 | 137176 | 137186 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 68164828 |
| 76 | NC_007144 | GGAA | 3 | 137304 | 137315 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 68164828 |
| 77 | NC_007144 | GGAT | 3 | 137577 | 137588 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 68164828 |
| 78 | NC_007144 | AAAT | 3 | 141401 | 141412 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 68164828 |
| 79 | NC_007144 | AAAG | 3 | 151279 | 151289 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 68164865 |
| 80 | NC_007144 | ACAA | 3 | 151323 | 151334 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 68164865 |
| 81 | NC_007144 | AAAT | 5 | 152171 | 152191 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | 68164865 |
| 82 | NC_007144 | TATT | 3 | 152335 | 152346 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 68164865 |