Tetra-nucleotide Imperfect Repeats of Huperzia lucidula chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_006861 | GAAA | 3 | 509 | 519 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 60117152 |
| 2 | NC_006861 | GGCA | 3 | 1904 | 1915 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 60117153 |
| 3 | NC_006861 | ATTG | 3 | 3490 | 3500 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 60117156 |
| 4 | NC_006861 | TAAA | 3 | 5204 | 5215 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 5 | NC_006861 | CTTC | 3 | 9459 | 9470 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 60117164 |
| 6 | NC_006861 | TCTT | 3 | 9944 | 9955 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 60117164 |
| 7 | NC_006861 | AATT | 3 | 10074 | 10085 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 60117164 |
| 8 | NC_006861 | GAAT | 3 | 13937 | 13948 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 60117169 |
| 9 | NC_006861 | TCAT | 3 | 14780 | 14791 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 10 | NC_006861 | AAAT | 3 | 14857 | 14868 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_006861 | GAAA | 3 | 15434 | 15444 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 60117170 |
| 12 | NC_006861 | ATCT | 3 | 17788 | 17798 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 60117171 |
| 13 | NC_006861 | TGAA | 3 | 18134 | 18144 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 60117171 |
| 14 | NC_006861 | TTAC | 3 | 23123 | 23134 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 60117171 |
| 15 | NC_006861 | TATT | 3 | 27306 | 27318 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 60117171 |
| 16 | NC_006861 | TGAA | 3 | 28850 | 28860 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 60117171 |
| 17 | NC_006861 | CTTT | 3 | 30189 | 30200 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 60117171 |
| 18 | NC_006861 | AGAA | 3 | 30575 | 30585 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 60117171 |
| 19 | NC_006861 | ATTT | 3 | 31945 | 31955 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 60117171 |
| 20 | NC_006861 | TTGT | 3 | 33448 | 33460 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | 60117171 |
| 21 | NC_006861 | GATG | 3 | 34264 | 34275 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 60117171 |
| 22 | NC_006861 | ACAA | 3 | 34575 | 34586 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 60117171 |
| 23 | NC_006861 | AAAG | 3 | 36933 | 36943 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 60117171 |
| 24 | NC_006861 | TTGG | 3 | 39282 | 39294 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 60117171 |
| 25 | NC_006861 | AAAT | 3 | 41629 | 41639 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 60117171 |
| 26 | NC_006861 | AATT | 3 | 42588 | 42599 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 60117171 |
| 27 | NC_006861 | AATT | 3 | 43597 | 43608 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 60117171 |
| 28 | NC_006861 | TTAC | 3 | 44563 | 44573 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 60117171 |
| 29 | NC_006861 | TACA | 3 | 45369 | 45379 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 60117171 |
| 30 | NC_006861 | AATT | 3 | 50246 | 50256 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 60117171 |
| 31 | NC_006861 | ATTT | 3 | 56030 | 56041 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 60117171 |
| 32 | NC_006861 | ATTA | 4 | 56953 | 56969 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | 60117171 |
| 33 | NC_006861 | TGAT | 3 | 57499 | 57509 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 60117171 |
| 34 | NC_006861 | TAAA | 3 | 59298 | 59308 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 60117171 |
| 35 | NC_006861 | GTTT | 3 | 60267 | 60278 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 60117171 |
| 36 | NC_006861 | TTCG | 3 | 60465 | 60475 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 60117171 |
| 37 | NC_006861 | ATGT | 3 | 66764 | 66774 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 60117171 |
| 38 | NC_006861 | ATTA | 3 | 71567 | 71578 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 60117171 |
| 39 | NC_006861 | ATTT | 4 | 72024 | 72040 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | 60117171 |
| 40 | NC_006861 | TTGG | 3 | 72113 | 72123 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 60117171 |
| 41 | NC_006861 | GAAT | 3 | 72464 | 72475 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 60117171 |
| 42 | NC_006861 | CATA | 3 | 73807 | 73818 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 60117171 |
| 43 | NC_006861 | GAAA | 3 | 74322 | 74333 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 60117171 |
| 44 | NC_006861 | TAAA | 3 | 74798 | 74809 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 60117171 |
| 45 | NC_006861 | TATT | 3 | 74810 | 74821 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 60117171 |
| 46 | NC_006861 | TATT | 3 | 74969 | 74980 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 60117171 |
| 47 | NC_006861 | ATTG | 3 | 76327 | 76337 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 60117171 |
| 48 | NC_006861 | ATTT | 3 | 77327 | 77337 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 60117171 |
| 49 | NC_006861 | TAAA | 3 | 79700 | 79711 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 60117171 |
| 50 | NC_006861 | TTGC | 3 | 80820 | 80830 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 60117171 |
| 51 | NC_006861 | TTAA | 3 | 85026 | 85037 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 60117171 |
| 52 | NC_006861 | TCTT | 6 | 87575 | 87598 | 24 | 0 % | 75 % | 0 % | 25 % | 8 % | 60117171 |
| 53 | NC_006861 | TACG | 3 | 89800 | 89810 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 60117171 |
| 54 | NC_006861 | AGTT | 3 | 90856 | 90867 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 60117171 |
| 55 | NC_006861 | TTCT | 3 | 91666 | 91676 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 60117171 |
| 56 | NC_006861 | CATT | 3 | 96694 | 96705 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 60117171 |
| 57 | NC_006861 | TTTA | 3 | 97322 | 97333 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 60117171 |
| 58 | NC_006861 | TTTA | 3 | 98199 | 98210 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 60117171 |
| 59 | NC_006861 | TTAT | 4 | 98314 | 98329 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 60117171 |
| 60 | NC_006861 | TTAA | 3 | 98611 | 98622 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 60117171 |
| 61 | NC_006861 | TTTA | 3 | 102045 | 102056 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 60117171 |
| 62 | NC_006861 | AGAT | 3 | 102364 | 102374 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 60117171 |
| 63 | NC_006861 | TCAT | 5 | 103731 | 103751 | 21 | 25 % | 50 % | 0 % | 25 % | 9 % | 60117171 |
| 64 | NC_006861 | CTTA | 3 | 103761 | 103772 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 60117171 |
| 65 | NC_006861 | AGGG | 3 | 109378 | 109388 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 60117171 |
| 66 | NC_006861 | CTTT | 3 | 111606 | 111616 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 60117171 |
| 67 | NC_006861 | GAGG | 3 | 113355 | 113366 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 60117171 |
| 68 | NC_006861 | AGGT | 3 | 113572 | 113583 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 60117171 |
| 69 | NC_006861 | ATTG | 3 | 115165 | 115176 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 60117171 |
| 70 | NC_006861 | AAGT | 3 | 125495 | 125505 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 60117171 |
| 71 | NC_006861 | ATTT | 3 | 125960 | 125972 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 60117171 |
| 72 | NC_006861 | CAAT | 3 | 126400 | 126411 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 60117171 |
| 73 | NC_006861 | ATTT | 3 | 127503 | 127515 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 60117171 |
| 74 | NC_006861 | AATT | 3 | 127537 | 127548 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 60117171 |
| 75 | NC_006861 | ATTC | 3 | 127723 | 127734 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 60117171 |
| 76 | NC_006861 | AACT | 3 | 130953 | 130964 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 60117171 |
| 77 | NC_006861 | TAAA | 3 | 137085 | 137095 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 60117171 |
| 78 | NC_006861 | AATT | 3 | 137100 | 137110 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 60117171 |
| 79 | NC_006861 | AATA | 3 | 138979 | 138990 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 60117171 |
| 80 | NC_006861 | AATG | 3 | 142547 | 142557 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 60117171 |
| 81 | NC_006861 | CAAT | 3 | 143286 | 143297 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 60117171 |
| 82 | NC_006861 | CTAC | 3 | 144877 | 144888 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 60117171 |
| 83 | NC_006861 | AGAA | 3 | 146841 | 146851 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 60117171 |