Penta-nucleotide Imperfect Repeats of Panax ginseng chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_006290 | TCTCT | 3 | 5386 | 5399 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 52220792 |
2 | NC_006290 | GAAAA | 3 | 5626 | 5640 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 52220792 |
3 | NC_006290 | TTCAG | 3 | 8010 | 8023 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | Non-Coding |
4 | NC_006290 | ATTTA | 3 | 15608 | 15622 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
5 | NC_006290 | ATCAA | 3 | 29370 | 29384 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
6 | NC_006290 | AAAAT | 3 | 61177 | 61190 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
7 | NC_006290 | AAGAA | 3 | 70355 | 70369 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
8 | NC_006290 | TATTC | 3 | 71573 | 71587 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
9 | NC_006290 | TCCGG | 3 | 95806 | 95820 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 52220857 |
10 | NC_006290 | TTTCG | 3 | 98394 | 98407 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 52220857 |
11 | NC_006290 | ATTAG | 5 | 100742 | 100766 | 25 | 40 % | 40 % | 20 % | 0 % | 8 % | 52220870 |
12 | NC_006290 | AAGAA | 3 | 112233 | 112247 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 52220870 |
13 | NC_006290 | TAAAA | 4 | 114980 | 114998 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | 52220870 |
14 | NC_006290 | AGAAA | 3 | 123595 | 123608 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 52220870 |
15 | NC_006290 | ACCGG | 3 | 146594 | 146608 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
16 | NC_006290 | CATAC | 3 | 147603 | 147616 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |