Hexa-nucleotide Imperfect Repeats of Saccharum hybrid cultivar SP-80-3280 chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_005878 | TCAAAA | 4 | 9980 | 10003 | 24 | 66.67 % | 16.67 % | 0 % | 16.67 % | 8 % | Non-Coding |
2 | NC_005878 | TTTGTT | 3 | 13215 | 13233 | 19 | 0 % | 83.33 % | 16.67 % | 0 % | 10 % | 48478721 |
3 | NC_005878 | ATAAGC | 3 | 47289 | 47306 | 18 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
4 | NC_005878 | TTTTGA | 4 | 55115 | 55138 | 24 | 16.67 % | 66.67 % | 16.67 % | 0 % | 8 % | 48478793 |
5 | NC_005878 | TCTTCA | 3 | 57260 | 57277 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | 48478793 |
6 | NC_005878 | CTTTTT | 3 | 69096 | 69113 | 18 | 0 % | 83.33 % | 0 % | 16.67 % | 5 % | 48478793 |
7 | NC_005878 | CAAAGA | 3 | 78963 | 78979 | 17 | 66.67 % | 0 % | 16.67 % | 16.67 % | 5 % | 48478793 |
8 | NC_005878 | GGGGAA | 3 | 109298 | 109316 | 19 | 33.33 % | 0 % | 66.67 % | 0 % | 5 % | 48478793 |
9 | NC_005878 | ATCTTA | 3 | 110410 | 110428 | 19 | 33.33 % | 50 % | 0 % | 16.67 % | 10 % | 48478793 |
10 | NC_005878 | AACATA | 3 | 116093 | 116109 | 17 | 66.67 % | 16.67 % | 0 % | 16.67 % | 5 % | 48478793 |