Hexa-nucleotide Imperfect Repeats of Physcomitrella patens subsp. patens chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_005087 | TAAAAA | 4 | 21 | 46 | 26 | 83.33 % | 16.67 % | 0 % | 0 % | 7 % | Non-Coding |
2 | NC_005087 | TAAAAA | 3 | 1801 | 1819 | 19 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | 34501389 |
3 | NC_005087 | GTTAAA | 3 | 11909 | 11927 | 19 | 50 % | 33.33 % | 16.67 % | 0 % | 10 % | 34501389 |
4 | NC_005087 | AAAAAT | 3 | 12067 | 12084 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | 34501389 |
5 | NC_005087 | AAAAAT | 3 | 14337 | 14353 | 17 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | Non-Coding |
6 | NC_005087 | TTAAAG | 3 | 16679 | 16696 | 18 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | 34501395 |
7 | NC_005087 | AATAAA | 3 | 40743 | 40760 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | Non-Coding |
8 | NC_005087 | TTAATT | 3 | 42066 | 42084 | 19 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | 34501419 |
9 | NC_005087 | TATTTT | 4 | 50189 | 50212 | 24 | 16.67 % | 83.33 % | 0 % | 0 % | 8 % | 34501421 |
10 | NC_005087 | AAAATA | 3 | 54494 | 54511 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | Non-Coding |
11 | NC_005087 | ATTTTT | 4 | 57268 | 57291 | 24 | 16.67 % | 83.33 % | 0 % | 0 % | 8 % | Non-Coding |
12 | NC_005087 | AAATTT | 3 | 59805 | 59821 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | Non-Coding |
13 | NC_005087 | CTAATT | 3 | 62380 | 62397 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | 34501429 |
14 | NC_005087 | TTATCT | 3 | 93847 | 93865 | 19 | 16.67 % | 66.67 % | 0 % | 16.67 % | 10 % | Non-Coding |
15 | NC_005087 | ATTTTG | 3 | 105998 | 106015 | 18 | 16.67 % | 66.67 % | 16.67 % | 0 % | 5 % | 34501459 |