Tri-nucleotide Imperfect Repeats of Physcomitrella patens subsp. patens chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_005087 | GTA | 4 | 353 | 364 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 34501389 |
2 | NC_005087 | TAT | 4 | 475 | 485 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501389 |
3 | NC_005087 | TTA | 4 | 2926 | 2936 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501389 |
4 | NC_005087 | TAT | 4 | 3571 | 3581 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501389 |
5 | NC_005087 | TAA | 4 | 4408 | 4418 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501389 |
6 | NC_005087 | TCT | 4 | 8517 | 8527 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 34501389 |
7 | NC_005087 | TAA | 4 | 11415 | 11426 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501389 |
8 | NC_005087 | AGA | 4 | 11670 | 11681 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 34501389 |
9 | NC_005087 | ATA | 4 | 13875 | 13885 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
10 | NC_005087 | ATA | 4 | 14270 | 14281 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
11 | NC_005087 | GCA | 4 | 14682 | 14694 | 13 | 33.33 % | 0 % | 33.33 % | 33.33 % | 7 % | 34501390 |
12 | NC_005087 | GTT | 4 | 15017 | 15027 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 146216940 |
13 | NC_005087 | ATA | 7 | 15483 | 15503 | 21 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
14 | NC_005087 | ATT | 4 | 15515 | 15526 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
15 | NC_005087 | TAT | 5 | 16214 | 16229 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
16 | NC_005087 | ATT | 4 | 16255 | 16267 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
17 | NC_005087 | AAT | 4 | 21273 | 21284 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501403 |
18 | NC_005087 | AAT | 4 | 23273 | 23283 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501406 |
19 | NC_005087 | AAT | 4 | 26249 | 26259 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
20 | NC_005087 | AGA | 4 | 27634 | 27646 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 34501408 |
21 | NC_005087 | TAA | 4 | 28518 | 28529 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
22 | NC_005087 | TAA | 4 | 28618 | 28629 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
23 | NC_005087 | ATT | 5 | 29293 | 29307 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
24 | NC_005087 | TAA | 4 | 31991 | 32001 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
25 | NC_005087 | ATA | 4 | 32144 | 32154 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
26 | NC_005087 | TAT | 5 | 32582 | 32597 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
27 | NC_005087 | ATA | 4 | 35497 | 35508 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
28 | NC_005087 | ATA | 5 | 35670 | 35683 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
29 | NC_005087 | CAT | 4 | 36632 | 36642 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 34501415 |
30 | NC_005087 | GTG | 4 | 37277 | 37288 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 34501415 |
31 | NC_005087 | ATG | 4 | 38136 | 38146 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 34501416 |
32 | NC_005087 | TAA | 4 | 39538 | 39549 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501416 |
33 | NC_005087 | TAA | 4 | 40415 | 40426 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
34 | NC_005087 | ATA | 4 | 44230 | 44241 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501420 |
35 | NC_005087 | AAT | 4 | 47688 | 47699 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501421 |
36 | NC_005087 | TAT | 4 | 49802 | 49813 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 34501421 |
37 | NC_005087 | ATT | 4 | 50536 | 50546 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501421 |
38 | NC_005087 | TCT | 4 | 51112 | 51122 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 34501421 |
39 | NC_005087 | TAA | 4 | 52948 | 52960 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
40 | NC_005087 | TAA | 5 | 52963 | 52977 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
41 | NC_005087 | TAT | 4 | 52984 | 52995 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
42 | NC_005087 | CAG | 4 | 53812 | 53823 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 34501422 |
43 | NC_005087 | TAA | 5 | 54297 | 54310 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
44 | NC_005087 | ATA | 4 | 54852 | 54863 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501423 |
45 | NC_005087 | AAT | 4 | 55802 | 55813 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501423 |
46 | NC_005087 | ATA | 4 | 57154 | 57164 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
47 | NC_005087 | CTA | 4 | 58674 | 58684 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 34501424 |
48 | NC_005087 | ATA | 4 | 58885 | 58896 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
49 | NC_005087 | TAA | 4 | 59221 | 59232 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
50 | NC_005087 | TAA | 4 | 60362 | 60374 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
51 | NC_005087 | ATT | 4 | 61139 | 61149 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
52 | NC_005087 | ATA | 4 | 61616 | 61626 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
53 | NC_005087 | TTA | 4 | 65704 | 65714 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
54 | NC_005087 | AAT | 4 | 66781 | 66791 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
55 | NC_005087 | TAT | 4 | 72093 | 72104 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 34501435 |
56 | NC_005087 | TAA | 4 | 73425 | 73435 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501435 |
57 | NC_005087 | TTA | 4 | 73436 | 73446 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501435 |
58 | NC_005087 | ATA | 4 | 77712 | 77725 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 34501436 |
59 | NC_005087 | ATT | 4 | 78018 | 78030 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
60 | NC_005087 | AAT | 4 | 80160 | 80170 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501441 |
61 | NC_005087 | TTA | 4 | 80867 | 80877 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501442 |
62 | NC_005087 | ATT | 5 | 80947 | 80960 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 34501442 |
63 | NC_005087 | ATT | 4 | 81314 | 81324 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501442 |
64 | NC_005087 | TAA | 4 | 81378 | 81389 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501442 |
65 | NC_005087 | TAA | 4 | 81763 | 81774 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501443 |
66 | NC_005087 | TGC | 4 | 82568 | 82579 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 34501444 |
67 | NC_005087 | TAT | 4 | 84053 | 84065 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 34501446 |
68 | NC_005087 | AGG | 4 | 87760 | 87771 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | Non-Coding |
69 | NC_005087 | ATA | 4 | 87992 | 88004 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
70 | NC_005087 | ATT | 4 | 88583 | 88594 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
71 | NC_005087 | AGA | 4 | 88744 | 88755 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
72 | NC_005087 | TAA | 4 | 96799 | 96810 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501448 |
73 | NC_005087 | TAT | 4 | 97164 | 97175 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
74 | NC_005087 | TAA | 4 | 100005 | 100015 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501451 |
75 | NC_005087 | TAA | 4 | 100115 | 100125 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501451 |
76 | NC_005087 | ATA | 4 | 100669 | 100680 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
77 | NC_005087 | TTA | 4 | 101733 | 101744 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
78 | NC_005087 | ATT | 4 | 104526 | 104537 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 34501457 |
79 | NC_005087 | CTT | 4 | 104710 | 104720 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 34501457 |
80 | NC_005087 | ATA | 4 | 105666 | 105677 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 34501458 |
81 | NC_005087 | TAT | 5 | 105735 | 105749 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
82 | NC_005087 | ATT | 4 | 106190 | 106200 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34501459 |
83 | NC_005087 | ATT | 4 | 106718 | 106729 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 34501459 |
84 | NC_005087 | ATT | 4 | 107849 | 107861 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 34501459 |
85 | NC_005087 | ATA | 4 | 108361 | 108371 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501459 |
86 | NC_005087 | ATT | 4 | 109694 | 109705 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 34501459 |
87 | NC_005087 | ATA | 4 | 110682 | 110692 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34501459 |
88 | NC_005087 | TCT | 4 | 119347 | 119358 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
89 | NC_005087 | TAT | 4 | 120098 | 120110 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
90 | NC_005087 | ATT | 4 | 122709 | 122720 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |