Tetra-nucleotide Imperfect Repeats of Physcomitrella patens subsp. patens chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_005087 | TAAC | 3 | 126 | 136 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_005087 | AAAT | 3 | 550 | 560 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501389 |
| 3 | NC_005087 | TTTA | 3 | 728 | 738 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34501389 |
| 4 | NC_005087 | AGTA | 3 | 823 | 834 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 34501389 |
| 5 | NC_005087 | AAAC | 3 | 1183 | 1193 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 34501389 |
| 6 | NC_005087 | AAAT | 3 | 3584 | 3595 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501389 |
| 7 | NC_005087 | TAAT | 3 | 3891 | 3902 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 34501389 |
| 8 | NC_005087 | AAAT | 3 | 6328 | 6339 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501389 |
| 9 | NC_005087 | TATT | 3 | 6357 | 6368 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501389 |
| 10 | NC_005087 | TAAT | 3 | 6404 | 6415 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 34501389 |
| 11 | NC_005087 | ATTT | 3 | 7008 | 7020 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 34501389 |
| 12 | NC_005087 | TAAA | 3 | 8941 | 8952 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 34501389 |
| 13 | NC_005087 | AAAT | 3 | 9521 | 9531 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501389 |
| 14 | NC_005087 | TCGA | 3 | 10463 | 10473 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 34501389 |
| 15 | NC_005087 | ATTT | 3 | 11566 | 11576 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34501389 |
| 16 | NC_005087 | TAAA | 3 | 12158 | 12168 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501389 |
| 17 | NC_005087 | ATTT | 3 | 12320 | 12331 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501389 |
| 18 | NC_005087 | AAAT | 5 | 12837 | 12855 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | 34501389 |
| 19 | NC_005087 | TTTA | 3 | 12994 | 13005 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501389 |
| 20 | NC_005087 | AAAT | 3 | 13380 | 13391 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501389 |
| 21 | NC_005087 | ATTT | 3 | 13636 | 13646 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 22 | NC_005087 | ATTT | 3 | 14432 | 14442 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 23 | NC_005087 | AAAT | 3 | 15848 | 15859 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_005087 | ATTT | 3 | 16518 | 16529 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501394 |
| 25 | NC_005087 | CAAA | 3 | 17822 | 17833 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 34501398 |
| 26 | NC_005087 | TTAA | 3 | 17915 | 17926 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 34501398 |
| 27 | NC_005087 | TGTT | 3 | 17982 | 17993 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 28 | NC_005087 | CTAA | 3 | 18000 | 18011 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | Non-Coding |
| 29 | NC_005087 | TAAA | 3 | 18204 | 18215 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_005087 | GTTT | 3 | 21239 | 21249 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 34501403 |
| 31 | NC_005087 | AAAT | 3 | 23023 | 23034 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_005087 | ATAA | 3 | 23636 | 23646 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501406 |
| 33 | NC_005087 | AATT | 3 | 26303 | 26313 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 34 | NC_005087 | ATTT | 3 | 28385 | 28395 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_005087 | ATAA | 3 | 29351 | 29362 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 36 | NC_005087 | AATT | 3 | 29370 | 29381 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 37 | NC_005087 | TTTA | 3 | 29464 | 29475 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501410 |
| 38 | NC_005087 | TTGG | 3 | 31034 | 31046 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 126021015 |
| 39 | NC_005087 | ATTT | 3 | 31135 | 31146 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_005087 | AAAT | 3 | 31166 | 31177 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_005087 | TTTG | 3 | 33293 | 33304 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_005087 | ATTA | 3 | 33465 | 33476 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_005087 | ATTT | 3 | 33531 | 33542 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 44 | NC_005087 | AATT | 3 | 35262 | 35273 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 34501414 |
| 45 | NC_005087 | AATT | 3 | 39010 | 39020 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 34501416 |
| 46 | NC_005087 | TTAA | 3 | 40850 | 40861 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_005087 | AAAT | 3 | 41727 | 41737 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 48 | NC_005087 | ATTT | 3 | 41765 | 41776 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 49 | NC_005087 | ATAA | 3 | 43365 | 43376 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501419 |
| 50 | NC_005087 | TTTA | 3 | 44624 | 44635 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 51 | NC_005087 | TTTA | 3 | 47082 | 47092 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34501421 |
| 52 | NC_005087 | TTGA | 3 | 47164 | 47174 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 34501421 |
| 53 | NC_005087 | ATAA | 3 | 50034 | 50044 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501421 |
| 54 | NC_005087 | TTAA | 3 | 50635 | 50645 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 34501421 |
| 55 | NC_005087 | AAAT | 3 | 50666 | 50677 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501421 |
| 56 | NC_005087 | TTTG | 3 | 50949 | 50960 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 34501421 |
| 57 | NC_005087 | TTTA | 3 | 52413 | 52423 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34501421 |
| 58 | NC_005087 | TTTG | 3 | 52671 | 52681 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 34501421 |
| 59 | NC_005087 | GTAA | 3 | 53105 | 53115 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 60 | NC_005087 | AAGT | 3 | 53918 | 53928 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34501422 |
| 61 | NC_005087 | TTGT | 3 | 56669 | 56679 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 62 | NC_005087 | AAAT | 3 | 56741 | 56751 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 63 | NC_005087 | GAAA | 3 | 57171 | 57182 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 64 | NC_005087 | TAAT | 3 | 58981 | 58991 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 65 | NC_005087 | ATTT | 3 | 60646 | 60656 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 66 | NC_005087 | TAAA | 3 | 61341 | 61351 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 67 | NC_005087 | TAAA | 3 | 61537 | 61549 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 68 | NC_005087 | AAAG | 3 | 61949 | 61959 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 69 | NC_005087 | CTTT | 3 | 61980 | 61990 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 70 | NC_005087 | TTAA | 3 | 62002 | 62013 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 71 | NC_005087 | TATT | 3 | 64157 | 64168 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 34501430 |
| 72 | NC_005087 | AAAT | 3 | 64766 | 64777 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501430 |
| 73 | NC_005087 | ATTT | 3 | 65640 | 65650 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 74 | NC_005087 | TTTA | 3 | 65662 | 65673 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 75 | NC_005087 | TTAA | 3 | 65685 | 65695 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 76 | NC_005087 | TTAT | 3 | 65845 | 65856 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 77 | NC_005087 | ATTT | 3 | 68685 | 68696 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 126021017 |
| 78 | NC_005087 | TTTC | 3 | 68837 | 68847 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 126021017 |
| 79 | NC_005087 | AATT | 3 | 73167 | 73178 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 34501435 |
| 80 | NC_005087 | ATTT | 3 | 73208 | 73219 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501435 |
| 81 | NC_005087 | AAAT | 3 | 73459 | 73470 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501435 |
| 82 | NC_005087 | TAAT | 3 | 73649 | 73660 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 34501435 |
| 83 | NC_005087 | TCTT | 3 | 73678 | 73689 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34501435 |
| 84 | NC_005087 | TATT | 4 | 73759 | 73774 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 34501435 |
| 85 | NC_005087 | ATAA | 3 | 76381 | 76392 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34501436 |
| 86 | NC_005087 | TTAT | 3 | 78455 | 78466 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 87 | NC_005087 | TTAA | 4 | 78765 | 78779 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 88 | NC_005087 | TTTA | 3 | 81466 | 81476 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34501442 |
| 89 | NC_005087 | ATTT | 3 | 84734 | 84745 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34501447 |
| 90 | NC_005087 | AATT | 3 | 85288 | 85300 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 91 | NC_005087 | AGAT | 3 | 85307 | 85317 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 92 | NC_005087 | ATTT | 3 | 88840 | 88851 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 93 | NC_005087 | AGGT | 3 | 91617 | 91628 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 94 | NC_005087 | TAAA | 3 | 95587 | 95597 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501448 |
| 95 | NC_005087 | AAAT | 5 | 97125 | 97143 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | Non-Coding |
| 96 | NC_005087 | TTAA | 3 | 98001 | 98012 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 97 | NC_005087 | TTTA | 3 | 98085 | 98095 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 98 | NC_005087 | TAAA | 3 | 98164 | 98175 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 99 | NC_005087 | ATAA | 4 | 98708 | 98723 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 100 | NC_005087 | ACTA | 3 | 99060 | 99070 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34501451 |
| 101 | NC_005087 | TAAA | 3 | 99930 | 99940 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34501451 |
| 102 | NC_005087 | TTAA | 3 | 103410 | 103420 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 34501456 |
| 103 | NC_005087 | CTTT | 3 | 103438 | 103449 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34501456 |
| 104 | NC_005087 | ACTT | 3 | 106286 | 106296 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34501459 |
| 105 | NC_005087 | ATTT | 3 | 109153 | 109163 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34501459 |
| 106 | NC_005087 | TGTT | 3 | 109204 | 109215 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 34501459 |
| 107 | NC_005087 | TAAA | 3 | 110009 | 110021 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 34501459 |
| 108 | NC_005087 | CTTT | 3 | 110693 | 110703 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 109 | NC_005087 | CTAC | 3 | 116472 | 116483 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 110 | NC_005087 | AAAT | 3 | 119251 | 119262 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 111 | NC_005087 | ATCT | 3 | 122785 | 122795 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |