Tetra-nucleotide Imperfect Repeats of Amborella trichopoda chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_005086 | AATA | 3 | 2133 | 2144 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_005086 | ATTT | 4 | 6605 | 6620 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 34500896 |
| 3 | NC_005086 | ATCA | 3 | 6988 | 6999 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 34500896 |
| 4 | NC_005086 | GAAC | 3 | 7560 | 7570 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 5 | NC_005086 | AATC | 3 | 7796 | 7806 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 6 | NC_005086 | AAAT | 3 | 8457 | 8467 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_005086 | AAAG | 3 | 9804 | 9815 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_005086 | TAAT | 3 | 10573 | 10583 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_005086 | TAAT | 4 | 10765 | 10780 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 10 | NC_005086 | CTTT | 3 | 11539 | 11551 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 11 | NC_005086 | ATCT | 3 | 12399 | 12410 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_005086 | CCCG | 3 | 12532 | 12542 | 11 | 0 % | 0 % | 25 % | 75 % | 9 % | Non-Coding |
| 13 | NC_005086 | ATTT | 3 | 15485 | 15496 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34500900 |
| 14 | NC_005086 | TTAG | 3 | 15793 | 15803 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 34500900 |
| 15 | NC_005086 | TAAC | 3 | 17045 | 17055 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_005086 | AGTA | 3 | 18881 | 18891 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_005086 | TCAA | 3 | 20203 | 20214 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 126022811 |
| 18 | NC_005086 | TCAT | 3 | 22548 | 22558 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 126022811 |
| 19 | NC_005086 | TTCA | 3 | 26053 | 26064 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 34500905 |
| 20 | NC_005086 | GAAT | 3 | 26131 | 26141 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34500905 |
| 21 | NC_005086 | TTAT | 3 | 32974 | 32984 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 22 | NC_005086 | GATA | 3 | 33525 | 33536 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_005086 | AACT | 3 | 33684 | 33694 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_005086 | TTCT | 3 | 34323 | 34335 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 25 | NC_005086 | TTTC | 3 | 35137 | 35148 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_005086 | TTCA | 3 | 36703 | 36713 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_005086 | TTTA | 3 | 37364 | 37374 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_005086 | GAAA | 3 | 39289 | 39300 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34500910 |
| 29 | NC_005086 | AATA | 3 | 40450 | 40461 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_005086 | AATG | 3 | 45297 | 45308 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 34500914 |
| 31 | NC_005086 | TGTT | 3 | 47180 | 47190 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_005086 | GAAA | 3 | 50569 | 50579 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_005086 | GAAT | 3 | 51352 | 51364 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 34 | NC_005086 | AGGG | 3 | 51833 | 51845 | 13 | 25 % | 0 % | 75 % | 0 % | 7 % | Non-Coding |
| 35 | NC_005086 | TAAT | 3 | 55395 | 55406 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 36 | NC_005086 | TAAA | 3 | 56065 | 56076 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_005086 | TTTC | 3 | 56301 | 56311 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_005086 | TTTC | 3 | 62569 | 62581 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 39 | NC_005086 | TAAA | 3 | 64709 | 64721 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 34500923 |
| 40 | NC_005086 | CAAG | 3 | 67348 | 67360 | 13 | 50 % | 0 % | 25 % | 25 % | 7 % | Non-Coding |
| 41 | NC_005086 | ATTG | 3 | 70016 | 70026 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 42 | NC_005086 | TTTG | 3 | 70672 | 70683 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 34500929 |
| 43 | NC_005086 | TTCC | 3 | 71310 | 71321 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 44 | NC_005086 | TTTC | 3 | 71814 | 71825 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 45 | NC_005086 | TTTA | 3 | 72156 | 72166 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 46 | NC_005086 | AGGG | 3 | 73826 | 73836 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 47 | NC_005086 | TTTC | 3 | 74830 | 74840 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 48 | NC_005086 | ATTC | 3 | 74860 | 74871 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 49 | NC_005086 | CTTT | 3 | 75050 | 75060 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34500937 |
| 50 | NC_005086 | CTTT | 3 | 75879 | 75889 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 51 | NC_005086 | AATA | 3 | 80827 | 80838 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34500973 |
| 52 | NC_005086 | AATA | 3 | 81599 | 81610 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34500973 |
| 53 | NC_005086 | TTAT | 3 | 81634 | 81645 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34500973 |
| 54 | NC_005086 | TACG | 3 | 85682 | 85694 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 34500973 |
| 55 | NC_005086 | TTAT | 5 | 87209 | 87227 | 19 | 25 % | 75 % | 0 % | 0 % | 10 % | 34500973 |
| 56 | NC_005086 | AGAA | 3 | 88690 | 88700 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34500973 |
| 57 | NC_005086 | AATT | 3 | 88912 | 88924 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 34500973 |
| 58 | NC_005086 | CAAT | 3 | 89523 | 89533 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34500973 |
| 59 | NC_005086 | TTCT | 3 | 94573 | 94583 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34500973 |
| 60 | NC_005086 | CTTT | 3 | 95733 | 95743 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34500973 |
| 61 | NC_005086 | AAAT | 3 | 96812 | 96823 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34500973 |
| 62 | NC_005086 | TCCT | 3 | 98045 | 98056 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 34500973 |
| 63 | NC_005086 | AATA | 3 | 98510 | 98522 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 34500973 |
| 64 | NC_005086 | TTTC | 3 | 98572 | 98583 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34500973 |
| 65 | NC_005086 | TCTA | 3 | 100596 | 100606 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34500973 |
| 66 | NC_005086 | TTTC | 3 | 101783 | 101794 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34500973 |
| 67 | NC_005086 | CTTT | 3 | 105856 | 105867 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34500973 |
| 68 | NC_005086 | TCTA | 3 | 110123 | 110134 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 34500973 |
| 69 | NC_005086 | TAAC | 4 | 110208 | 110222 | 15 | 50 % | 25 % | 0 % | 25 % | 6 % | 34500973 |
| 70 | NC_005086 | AAGG | 3 | 110278 | 110288 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 34500973 |
| 71 | NC_005086 | GAGG | 3 | 112993 | 113004 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 34500973 |
| 72 | NC_005086 | TAAG | 3 | 114330 | 114340 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34500973 |
| 73 | NC_005086 | ATCA | 3 | 114752 | 114762 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34500973 |
| 74 | NC_005086 | GGAA | 3 | 116293 | 116303 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 34500973 |
| 75 | NC_005086 | ACTA | 3 | 119484 | 119494 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34500973 |
| 76 | NC_005086 | TTAT | 6 | 120023 | 120047 | 25 | 25 % | 75 % | 0 % | 0 % | 8 % | 34500973 |
| 77 | NC_005086 | TCTT | 3 | 121190 | 121201 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34500973 |
| 78 | NC_005086 | AGAA | 3 | 121491 | 121502 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34500973 |
| 79 | NC_005086 | GAAA | 3 | 123224 | 123235 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34500973 |
| 80 | NC_005086 | ATCT | 3 | 125082 | 125092 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34500973 |
| 81 | NC_005086 | TTGA | 3 | 125770 | 125781 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 34500973 |
| 82 | NC_005086 | GATG | 3 | 125803 | 125814 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 34500973 |
| 83 | NC_005086 | AAAG | 3 | 128888 | 128899 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 34500973 |
| 84 | NC_005086 | TTAT | 3 | 133846 | 133856 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34500973 |
| 85 | NC_005086 | ATTT | 3 | 133869 | 133881 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 34500973 |
| 86 | NC_005086 | CATT | 3 | 133960 | 133971 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 34500973 |
| 87 | NC_005086 | ATCC | 3 | 134646 | 134657 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 34500973 |
| 88 | NC_005086 | TTTC | 3 | 134874 | 134884 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34500973 |
| 89 | NC_005086 | TTTC | 3 | 135010 | 135021 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34500973 |
| 90 | NC_005086 | TTCC | 3 | 137354 | 137364 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 34500973 |
| 91 | NC_005086 | TGAT | 3 | 138895 | 138905 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 34500973 |
| 92 | NC_005086 | CTTA | 3 | 139317 | 139327 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34500973 |
| 93 | NC_005086 | CCTT | 3 | 143369 | 143379 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 34500973 |
| 94 | NC_005086 | GTTA | 4 | 143435 | 143449 | 15 | 25 % | 50 % | 25 % | 0 % | 6 % | 34500973 |
| 95 | NC_005086 | AAAG | 3 | 147790 | 147801 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34500973 |
| 96 | NC_005086 | CATA | 3 | 148804 | 148815 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 34500973 |
| 97 | NC_005086 | TGAA | 3 | 155073 | 155084 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 34500977 |
| 98 | NC_005086 | AAAG | 3 | 157914 | 157924 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34500977 |
| 99 | NC_005086 | ATTT | 3 | 158947 | 158958 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34500977 |