Tetra-nucleotide Imperfect Repeats of Cyanidioschyzon merolae strain 10D chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_004799 | TGCA | 3 | 3830 | 3841 | 12 | 25 % | 25 % | 25 % | 25 % | 0 % | 30468052 |
| 2 | NC_004799 | TCCC | 3 | 10529 | 10540 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | 30468061 |
| 3 | NC_004799 | TAAA | 3 | 12380 | 12392 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 30468063 |
| 4 | NC_004799 | TAAG | 3 | 15021 | 15032 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30468066 |
| 5 | NC_004799 | AGAA | 3 | 16765 | 16775 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_004799 | ATGA | 3 | 17018 | 17029 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30468068 |
| 7 | NC_004799 | CAGT | 3 | 20279 | 20290 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 8 | NC_004799 | TACC | 3 | 23536 | 23546 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 30468072 |
| 9 | NC_004799 | CCAT | 3 | 26295 | 26305 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 30468077 |
| 10 | NC_004799 | TGAT | 3 | 28088 | 28100 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 30468079 |
| 11 | NC_004799 | ATTA | 3 | 31046 | 31057 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 30468084 |
| 12 | NC_004799 | GGTA | 3 | 44764 | 44775 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 13 | NC_004799 | AGAA | 4 | 47049 | 47064 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 30468107 |
| 14 | NC_004799 | AAAT | 3 | 49490 | 49500 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 30468110 |
| 15 | NC_004799 | TAGA | 3 | 50269 | 50279 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 30468111 |
| 16 | NC_004799 | ATGA | 4 | 51614 | 51634 | 21 | 50 % | 25 % | 25 % | 0 % | 4 % | Non-Coding |
| 17 | NC_004799 | TTGC | 3 | 58124 | 58134 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | Non-Coding |
| 18 | NC_004799 | CTTA | 3 | 58355 | 58365 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 30468122 |
| 19 | NC_004799 | TCAA | 3 | 64350 | 64361 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 30468130 |
| 20 | NC_004799 | TTTC | 3 | 70714 | 70724 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 30468137 |
| 21 | NC_004799 | TGAT | 3 | 72945 | 72955 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 30468139 |
| 22 | NC_004799 | TGTT | 3 | 75127 | 75137 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 30468140 |
| 23 | NC_004799 | CATA | 3 | 75830 | 75842 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 30468141 |
| 24 | NC_004799 | GGTT | 3 | 76255 | 76265 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 30468142 |
| 25 | NC_004799 | TATG | 3 | 77974 | 77986 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 30468145 |
| 26 | NC_004799 | AAGG | 3 | 91413 | 91423 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 30468160 |
| 27 | NC_004799 | AATG | 3 | 94353 | 94364 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30468168 |
| 28 | NC_004799 | TTTG | 3 | 94423 | 94434 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 30468168 |
| 29 | NC_004799 | CTTT | 3 | 99295 | 99305 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 30468175 |
| 30 | NC_004799 | AAAC | 3 | 99487 | 99499 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 30468175 |
| 31 | NC_004799 | ACAG | 3 | 100589 | 100599 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 30468176 |
| 32 | NC_004799 | TGTA | 3 | 101333 | 101344 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 30468176 |
| 33 | NC_004799 | GTAG | 3 | 107988 | 108000 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 30468185 |
| 34 | NC_004799 | TTTA | 3 | 112132 | 112143 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 126165894 |
| 35 | NC_004799 | AAGG | 3 | 113620 | 113630 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 30468199 |
| 36 | NC_004799 | GAAT | 3 | 114755 | 114766 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30468201 |
| 37 | NC_004799 | AAAC | 3 | 116015 | 116026 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 30468203 |
| 38 | NC_004799 | AATC | 3 | 117622 | 117632 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 126165893 |
| 39 | NC_004799 | AAGC | 3 | 119500 | 119511 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 30468210 |
| 40 | NC_004799 | TTAA | 3 | 124277 | 124289 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 30468218 |
| 41 | NC_004799 | TTAT | 3 | 135702 | 135712 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 30468230 |
| 42 | NC_004799 | CATT | 3 | 136589 | 136601 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 30468231 |
| 43 | NC_004799 | CAAA | 3 | 138508 | 138519 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_004799 | AAGA | 3 | 139980 | 139990 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 30468237 |
| 45 | NC_004799 | CTTT | 3 | 144341 | 144351 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_004799 | AAAG | 3 | 146800 | 146810 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 30468251 |