Tetra-nucleotide Imperfect Repeats of Pinus koraiensis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_004677 | GATG | 3 | 1375 | 1387 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 145408430 |
| 2 | NC_004677 | ATGA | 3 | 4119 | 4130 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 145408434 |
| 3 | NC_004677 | GAAA | 3 | 6366 | 6376 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 145408439 |
| 4 | NC_004677 | AATT | 3 | 12175 | 12186 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 29565715 |
| 5 | NC_004677 | ATTT | 3 | 12664 | 12676 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 29565715 |
| 6 | NC_004677 | ATTT | 3 | 17196 | 17208 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 29565574 |
| 7 | NC_004677 | ATCC | 3 | 26183 | 26193 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 145408469 |
| 8 | NC_004677 | TTAA | 3 | 28600 | 28611 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_004677 | AAAG | 3 | 29488 | 29499 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 145408475 |
| 10 | NC_004677 | AAAT | 3 | 33942 | 33954 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 145408422 |
| 11 | NC_004677 | ACAA | 3 | 35239 | 35250 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 145408422 |
| 12 | NC_004677 | GAAA | 3 | 40660 | 40670 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 145408422 |
| 13 | NC_004677 | TTTA | 3 | 41237 | 41248 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 145408422 |
| 14 | NC_004677 | GATA | 3 | 42683 | 42694 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 145408422 |
| 15 | NC_004677 | GAAA | 3 | 49460 | 49470 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 145408422 |
| 16 | NC_004677 | TTTC | 3 | 50763 | 50773 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 145408422 |
| 17 | NC_004677 | ATTC | 3 | 51618 | 51629 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 145408422 |
| 18 | NC_004677 | ATTT | 3 | 54266 | 54277 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 145408422 |
| 19 | NC_004677 | TCGT | 3 | 60071 | 60081 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 145408422 |
| 20 | NC_004677 | AGTT | 3 | 60336 | 60346 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 145408422 |
| 21 | NC_004677 | TCTT | 3 | 63366 | 63377 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 145408422 |
| 22 | NC_004677 | AATT | 3 | 63686 | 63696 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 145408422 |
| 23 | NC_004677 | AATT | 3 | 75577 | 75587 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 145408422 |
| 24 | NC_004677 | CATT | 3 | 77767 | 77778 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 145408422 |
| 25 | NC_004677 | TTTC | 3 | 79632 | 79643 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 145408422 |
| 26 | NC_004677 | GATC | 3 | 81288 | 81299 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 145408422 |
| 27 | NC_004677 | ATCC | 3 | 84935 | 84946 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 145408422 |
| 28 | NC_004677 | GAGG | 3 | 88192 | 88203 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 145408422 |
| 29 | NC_004677 | AGGT | 3 | 88399 | 88410 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 145408422 |
| 30 | NC_004677 | AACC | 3 | 90032 | 90044 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 145408422 |
| 31 | NC_004677 | TAGA | 3 | 97607 | 97618 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 145408422 |
| 32 | NC_004677 | GAAA | 3 | 98196 | 98206 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 145408422 |
| 33 | NC_004677 | TTCT | 3 | 100279 | 100289 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 145408422 |
| 34 | NC_004677 | ATTT | 3 | 101435 | 101446 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 145408422 |
| 35 | NC_004677 | TCCA | 3 | 101651 | 101662 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 145408422 |
| 36 | NC_004677 | AAAT | 3 | 103779 | 103789 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 145408422 |
| 37 | NC_004677 | TTCA | 3 | 104391 | 104402 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 145408422 |
| 38 | NC_004677 | AAAG | 3 | 107259 | 107270 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 145408422 |
| 39 | NC_004677 | TCTA | 3 | 107988 | 107999 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 40 | NC_004677 | ATTT | 3 | 108898 | 108908 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |