Tetra-nucleotide Imperfect Repeats of Medicago truncatula chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_003119 | ATTA | 4 | 2668 | 2683 | 16 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_003119 | ATTT | 3 | 2842 | 2853 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_003119 | CTAT | 3 | 2946 | 2956 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 4 | NC_003119 | GAAA | 3 | 3005 | 3016 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_003119 | TTTA | 3 | 5008 | 5019 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_003119 | AATA | 5 | 5223 | 5241 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | 153012159 |
| 7 | NC_003119 | ATGA | 3 | 6983 | 6994 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_003119 | TATT | 3 | 8470 | 8481 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 9 | NC_003119 | AAAT | 3 | 9847 | 9858 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 153012164 |
| 10 | NC_003119 | TATT | 3 | 10770 | 10782 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 153012164 |
| 11 | NC_003119 | ATTT | 3 | 12737 | 12748 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 153012166 |
| 12 | NC_003119 | GTTT | 3 | 13530 | 13541 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 153012167 |
| 13 | NC_003119 | ATTT | 3 | 13582 | 13592 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 153012167 |
| 14 | NC_003119 | CTTT | 3 | 13763 | 13774 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 153012167 |
| 15 | NC_003119 | AAGA | 3 | 14944 | 14955 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 153012167 |
| 16 | NC_003119 | TATT | 4 | 18798 | 18812 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 17 | NC_003119 | TATT | 4 | 19038 | 19052 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 18 | NC_003119 | TTTA | 3 | 19235 | 19245 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 19 | NC_003119 | CTTA | 3 | 20923 | 20933 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_003119 | TCTA | 3 | 23843 | 23853 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_003119 | CCTT | 3 | 24989 | 24999 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 22 | NC_003119 | AACC | 3 | 25852 | 25863 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | Non-Coding |
| 23 | NC_003119 | TATT | 3 | 34659 | 34671 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 153012189 |
| 24 | NC_003119 | ATCA | 3 | 35626 | 35638 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 153012189 |
| 25 | NC_003119 | TTTC | 3 | 36997 | 37007 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 153012189 |
| 26 | NC_003119 | AAAG | 3 | 37255 | 37265 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 153012189 |
| 27 | NC_003119 | AAAG | 3 | 37303 | 37314 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 153012189 |
| 28 | NC_003119 | AAAG | 3 | 37348 | 37359 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 153012189 |
| 29 | NC_003119 | ATTG | 3 | 37958 | 37969 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 153012189 |
| 30 | NC_003119 | ATTG | 3 | 38934 | 38944 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 153012189 |
| 31 | NC_003119 | ATTT | 3 | 39320 | 39331 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 153012189 |
| 32 | NC_003119 | ATCA | 3 | 40338 | 40349 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 153012189 |
| 33 | NC_003119 | TTTA | 3 | 41514 | 41524 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 153012189 |
| 34 | NC_003119 | ATTG | 3 | 42862 | 42872 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 153012189 |
| 35 | NC_003119 | GAAA | 4 | 43324 | 43339 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 153012189 |
| 36 | NC_003119 | GAAA | 3 | 44654 | 44665 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 153012189 |
| 37 | NC_003119 | ATTA | 3 | 45273 | 45285 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 153012189 |
| 38 | NC_003119 | TCAT | 3 | 45510 | 45521 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 153012189 |
| 39 | NC_003119 | TTTA | 3 | 54208 | 54219 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 153012189 |
| 40 | NC_003119 | TATT | 3 | 54224 | 54235 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 153012189 |
| 41 | NC_003119 | AGAT | 3 | 54317 | 54329 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 153012189 |
| 42 | NC_003119 | AAAT | 3 | 56463 | 56474 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 153012189 |
| 43 | NC_003119 | GAAA | 4 | 57653 | 57668 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 44 | NC_003119 | TATT | 4 | 58321 | 58336 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 153012191 |
| 45 | NC_003119 | ATTT | 3 | 61278 | 61289 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 46 | NC_003119 | CAAA | 3 | 64504 | 64515 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 47 | NC_003119 | TTCA | 3 | 64544 | 64555 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 153012201 |
| 48 | NC_003119 | ATTC | 3 | 72256 | 72266 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 49 | NC_003119 | AATT | 4 | 72735 | 72749 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | 153012206 |
| 50 | NC_003119 | CTGT | 3 | 73753 | 73764 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 153012206 |
| 51 | NC_003119 | TAAT | 3 | 75745 | 75759 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 52 | NC_003119 | TTCA | 3 | 76490 | 76500 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 53 | NC_003119 | TGAA | 3 | 77077 | 77088 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 54 | NC_003119 | TAAT | 5 | 77285 | 77305 | 21 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 55 | NC_003119 | TCAA | 3 | 79540 | 79551 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 196154823 |
| 56 | NC_003119 | AATT | 3 | 81190 | 81200 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 196154823 |
| 57 | NC_003119 | GTTC | 4 | 81697 | 81712 | 16 | 0 % | 50 % | 25 % | 25 % | 6 % | 196154823 |
| 58 | NC_003119 | TACC | 3 | 86191 | 86202 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 153012212 |
| 59 | NC_003119 | CCTA | 3 | 87389 | 87399 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 153012213 |
| 60 | NC_003119 | GATA | 3 | 89332 | 89342 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 153012213 |
| 61 | NC_003119 | CATT | 3 | 89708 | 89719 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 153012213 |
| 62 | NC_003119 | TCAT | 3 | 89782 | 89792 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 63 | NC_003119 | ATTT | 4 | 90137 | 90152 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 64 | NC_003119 | TTTG | 3 | 90752 | 90763 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 65 | NC_003119 | CTTT | 3 | 92718 | 92728 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 66 | NC_003119 | AAAG | 3 | 93184 | 93194 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 67 | NC_003119 | GATA | 3 | 95434 | 95445 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 68 | NC_003119 | GAAA | 3 | 97536 | 97547 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 171259329 |
| 69 | NC_003119 | GCTT | 3 | 97939 | 97949 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 171259329 |
| 70 | NC_003119 | TAAA | 3 | 98688 | 98699 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 71 | NC_003119 | AATA | 3 | 101757 | 101767 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 153012220 |
| 72 | NC_003119 | AAGA | 3 | 103205 | 103216 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 153012221 |
| 73 | NC_003119 | CATA | 3 | 104107 | 104119 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 153012221 |
| 74 | NC_003119 | TTTG | 3 | 105733 | 105744 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 75 | NC_003119 | TTCC | 3 | 106242 | 106253 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 153012222 |
| 76 | NC_003119 | TATT | 4 | 106722 | 106737 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 153012222 |
| 77 | NC_003119 | AATT | 3 | 108442 | 108453 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 153012223 |
| 78 | NC_003119 | TTAA | 3 | 109634 | 109645 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 79 | NC_003119 | AATA | 4 | 109791 | 109805 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 80 | NC_003119 | TAAA | 3 | 110248 | 110259 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 81 | NC_003119 | TATC | 3 | 113902 | 113912 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 82 | NC_003119 | TCTT | 3 | 114096 | 114106 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 83 | NC_003119 | ATTT | 3 | 117210 | 117220 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 84 | NC_003119 | TGCA | 3 | 118507 | 118519 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 153012229 |
| 85 | NC_003119 | GAAT | 3 | 119283 | 119294 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 86 | NC_003119 | CATC | 3 | 119709 | 119721 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | Non-Coding |
| 87 | NC_003119 | ATTT | 3 | 119937 | 119947 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 88 | NC_003119 | AATG | 3 | 121896 | 121906 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 153012230 |
| 89 | NC_003119 | AATT | 3 | 123684 | 123695 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 90 | NC_003119 | TTTC | 3 | 123719 | 123730 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |