Tetra-nucleotide Imperfect Repeats of Triticum aestivum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_002762 | AAGT | 3 | 790 | 800 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 14017552 |
| 2 | NC_002762 | TTCT | 3 | 5135 | 5145 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 14017554 |
| 3 | NC_002762 | ATAA | 3 | 5399 | 5409 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 14017554 |
| 4 | NC_002762 | CTTA | 3 | 5445 | 5457 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 14017554 |
| 5 | NC_002762 | TTCT | 3 | 7239 | 7249 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 14017555 |
| 6 | NC_002762 | TTCT | 3 | 8125 | 8135 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 7 | NC_002762 | GAAA | 3 | 10456 | 10467 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 14017558 |
| 8 | NC_002762 | AAAT | 3 | 14635 | 14645 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_002762 | CTTT | 3 | 15195 | 15206 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 10 | NC_002762 | GTAT | 3 | 15967 | 15977 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 11 | NC_002762 | AAAT | 3 | 16891 | 16901 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_002762 | TTTC | 3 | 17234 | 17244 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_002762 | ATCA | 3 | 17778 | 17788 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_002762 | ATGA | 3 | 18144 | 18155 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 15 | NC_002762 | TTTC | 3 | 20518 | 20530 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 14017562 |
| 16 | NC_002762 | AGAA | 3 | 25119 | 25130 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 14017563 |
| 17 | NC_002762 | TTCA | 3 | 27774 | 27784 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 14017564 |
| 18 | NC_002762 | TTAA | 3 | 30024 | 30035 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_002762 | AGAA | 3 | 31012 | 31022 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_002762 | ATTG | 3 | 32447 | 32458 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_002762 | CTTT | 3 | 32784 | 32794 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_002762 | ATTG | 3 | 38455 | 38465 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 14017571 |
| 23 | NC_002762 | AAGA | 3 | 39702 | 39713 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 14017572 |
| 24 | NC_002762 | GACT | 3 | 39741 | 39752 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 14017572 |
| 25 | NC_002762 | AATG | 3 | 40101 | 40112 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 14017572 |
| 26 | NC_002762 | CTAG | 3 | 40645 | 40657 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 14017572 |
| 27 | NC_002762 | ATCA | 3 | 42750 | 42760 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 14017573 |
| 28 | NC_002762 | AGAA | 4 | 42904 | 42918 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 14017573 |
| 29 | NC_002762 | TCCT | 3 | 43164 | 43175 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 14017573 |
| 30 | NC_002762 | TTCA | 3 | 44439 | 44450 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_002762 | GAAA | 3 | 45284 | 45294 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_002762 | AAAT | 3 | 46539 | 46550 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_002762 | TAAA | 3 | 46603 | 46613 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 34 | NC_002762 | AGAA | 3 | 46739 | 46750 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_002762 | TTGA | 3 | 47062 | 47074 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 36 | NC_002762 | CAGA | 3 | 48748 | 48758 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 14017575 |
| 37 | NC_002762 | AGAA | 3 | 50550 | 50560 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 38 | NC_002762 | AATT | 3 | 54233 | 54244 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_002762 | TGCA | 3 | 55794 | 55806 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 14017580 |
| 40 | NC_002762 | AATA | 3 | 56593 | 56604 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_002762 | ACTA | 3 | 58522 | 58532 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 42 | NC_002762 | TTTA | 3 | 61124 | 61134 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_002762 | TTGT | 3 | 62645 | 62657 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 44 | NC_002762 | TTCA | 3 | 63925 | 63936 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 45 | NC_002762 | AAAG | 3 | 64042 | 64052 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_002762 | TATT | 3 | 64935 | 64945 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 47 | NC_002762 | GAAA | 3 | 65259 | 65270 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 14017592 |
| 48 | NC_002762 | TAAA | 3 | 65482 | 65493 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 49 | NC_002762 | ATGT | 3 | 67384 | 67394 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 14017595 |
| 50 | NC_002762 | AGAA | 3 | 68245 | 68256 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 14017595 |
| 51 | NC_002762 | ACTT | 3 | 70513 | 70523 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 14017595 |
| 52 | NC_002762 | GAAA | 4 | 71625 | 71640 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 14017595 |
| 53 | NC_002762 | TTAT | 3 | 79715 | 79726 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 14017595 |
| 54 | NC_002762 | GAAA | 3 | 80779 | 80789 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 14017595 |
| 55 | NC_002762 | TTCT | 3 | 88146 | 88156 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 14017595 |
| 56 | NC_002762 | AAAC | 3 | 93024 | 93036 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 14017595 |
| 57 | NC_002762 | ATCC | 3 | 93158 | 93169 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 14017595 |
| 58 | NC_002762 | ACGG | 3 | 96272 | 96283 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 14017595 |
| 59 | NC_002762 | AGGT | 3 | 96556 | 96567 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 14017595 |
| 60 | NC_002762 | AACG | 3 | 97881 | 97892 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 14017595 |
| 61 | NC_002762 | AAAG | 4 | 99204 | 99219 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 14017595 |
| 62 | NC_002762 | GAAT | 3 | 100819 | 100829 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 14017595 |
| 63 | NC_002762 | AAGG | 3 | 100831 | 100842 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 14017595 |
| 64 | NC_002762 | AAAG | 3 | 104182 | 104192 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 14017595 |
| 65 | NC_002762 | AGAA | 3 | 104947 | 104957 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 14017595 |
| 66 | NC_002762 | TTTA | 3 | 109251 | 109262 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 14017595 |
| 67 | NC_002762 | ATTC | 3 | 114065 | 114075 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 14017595 |
| 68 | NC_002762 | CTTT | 4 | 115675 | 115690 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 14017595 |
| 69 | NC_002762 | TCGT | 3 | 117001 | 117012 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 14017595 |
| 70 | NC_002762 | CTTA | 3 | 117208 | 117218 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 14017595 |
| 71 | NC_002762 | CCGT | 3 | 118611 | 118622 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 14017595 |
| 72 | NC_002762 | GGAT | 3 | 121725 | 121736 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 14017595 |
| 73 | NC_002762 | AGAA | 3 | 126738 | 126748 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 14017631 |
| 74 | NC_002762 | TTTC | 3 | 128880 | 128890 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 14017632 |
| 75 | NC_002762 | TGAA | 3 | 131315 | 131326 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 76 | NC_002762 | CTTT | 3 | 131333 | 131344 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 77 | NC_002762 | TTTC | 3 | 134105 | 134115 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |