All Imperfect Repeats of Trichinella spiralis mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_002681 | CA | 6 | 478 | 488 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | 13195736 |
2 | NC_002681 | AAC | 4 | 1018 | 1029 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 13195737 |
3 | NC_002681 | CAA | 4 | 2385 | 2396 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 13195737 |
4 | NC_002681 | AAAC | 3 | 2886 | 2898 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 13195738 |
5 | NC_002681 | ACA | 4 | 3741 | 3751 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 13195738 |
6 | NC_002681 | CAAC | 3 | 3818 | 3829 | 12 | 50 % | 0 % | 0 % | 50 % | 0 % | 13195738 |
7 | NC_002681 | CAA | 4 | 4091 | 4101 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 13195739 |
8 | NC_002681 | ATA | 4 | 4338 | 4348 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
9 | NC_002681 | ACA | 4 | 4663 | 4675 | 13 | 66.67 % | 0 % | 0 % | 33.33 % | 7 % | 13195740 |
10 | NC_002681 | CTA | 4 | 5500 | 5511 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 13195741 |
11 | NC_002681 | ATAG | 3 | 6902 | 6913 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
12 | NC_002681 | AAT | 4 | 7065 | 7075 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
13 | NC_002681 | AAAT | 3 | 7261 | 7272 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
14 | NC_002681 | AACCA | 3 | 7818 | 7833 | 16 | 60 % | 0 % | 0 % | 40 % | 6 % | 13195742 |
15 | NC_002681 | AAT | 4 | 8307 | 8318 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 13195742 |
16 | NC_002681 | ACA | 4 | 8796 | 8806 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 13195743 |
17 | NC_002681 | TTC | 4 | 8876 | 8887 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 13195743 |
18 | NC_002681 | ATA | 4 | 9653 | 9663 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
19 | NC_002681 | ATT | 4 | 9737 | 9748 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
20 | NC_002681 | CTA | 4 | 10839 | 10849 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 13195746 |
21 | NC_002681 | AGG | 4 | 11293 | 11304 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 13195746 |
22 | NC_002681 | TAA | 4 | 12251 | 12262 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 13195747 |
23 | NC_002681 | CTA | 4 | 12838 | 12848 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 13195747 |
24 | NC_002681 | TCA | 4 | 12941 | 12951 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
25 | NC_002681 | TCTA | 3 | 13047 | 13057 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 13195748 |
26 | NC_002681 | ATA | 4 | 13462 | 13473 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 13195748 |
27 | NC_002681 | CTC | 4 | 13759 | 13770 | 12 | 0 % | 33.33 % | 0 % | 66.67 % | 8 % | 13195748 |
28 | NC_002681 | ATC | 4 | 13777 | 13787 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 13195748 |
29 | NC_002681 | TA | 6 | 14225 | 14236 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
30 | NC_002681 | AAT | 4 | 14313 | 14323 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
31 | NC_002681 | AAT | 4 | 14502 | 14513 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
32 | NC_002681 | AT | 6 | 14542 | 14552 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
33 | NC_002681 | TATAA | 4 | 14758 | 14778 | 21 | 60 % | 40 % | 0 % | 0 % | 9 % | Non-Coding |
34 | NC_002681 | AT | 6 | 14836 | 14846 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
35 | NC_002681 | TA | 6 | 14852 | 14862 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
36 | NC_002681 | TAT | 4 | 14861 | 14873 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
37 | NC_002681 | ATA | 5 | 14886 | 14901 | 16 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
38 | NC_002681 | AATA | 3 | 14948 | 14960 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
39 | NC_002681 | A | 14 | 15153 | 15166 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
40 | NC_002681 | N | 50 | 15167 | 15216 | 50 | 0 % | 0 % | 0 % | 0 % | 0 % | Non-Coding |
41 | NC_002681 | A | 14 | 15219 | 15232 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
42 | NC_002681 | TA | 6 | 15647 | 15658 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
43 | NC_002681 | AAT | 4 | 15735 | 15745 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
44 | NC_002681 | AAT | 4 | 15924 | 15935 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
45 | NC_002681 | AT | 6 | 15964 | 15974 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
46 | NC_002681 | TATAA | 4 | 16180 | 16200 | 21 | 60 % | 40 % | 0 % | 0 % | 9 % | Non-Coding |
47 | NC_002681 | AT | 6 | 16258 | 16268 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
48 | NC_002681 | TA | 6 | 16274 | 16284 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
49 | NC_002681 | TAT | 4 | 16283 | 16295 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
50 | NC_002681 | ATA | 5 | 16308 | 16323 | 16 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
51 | NC_002681 | AATA | 3 | 16370 | 16382 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
52 | NC_002681 | ACCAAA | 3 | 16559 | 16576 | 18 | 66.67 % | 0 % | 0 % | 33.33 % | 5 % | Non-Coding |
53 | NC_002681 | AAGCC | 3 | 16595 | 16609 | 15 | 40 % | 0 % | 20 % | 40 % | 6 % | Non-Coding |
54 | NC_002681 | ACA | 4 | 16649 | 16660 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | Non-Coding |