Tetra-nucleotide Imperfect Repeats of Nicotiana tabacum plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_001879 | TAAA | 3 | 426 | 437 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_001879 | AAGA | 3 | 438 | 449 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_001879 | AAGT | 3 | 1235 | 1245 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11465935 |
| 4 | NC_001879 | CATT | 3 | 4149 | 4160 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_001879 | TTTC | 3 | 5491 | 5501 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 11465937 |
| 6 | NC_001879 | AATA | 3 | 6001 | 6012 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465937 |
| 7 | NC_001879 | TTAC | 3 | 7759 | 7771 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 8 | NC_001879 | CAAG | 3 | 9074 | 9084 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 9 | NC_001879 | ATGA | 3 | 12745 | 12757 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 81238325 |
| 10 | NC_001879 | AAAT | 3 | 12841 | 12851 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 81238325 |
| 11 | NC_001879 | AAAT | 3 | 13563 | 13573 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_001879 | TATT | 3 | 16206 | 16218 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 13 | NC_001879 | AAAC | 3 | 19017 | 19027 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 126165915 |
| 14 | NC_001879 | GAAT | 3 | 19605 | 19615 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 126165915 |
| 15 | NC_001879 | GTTT | 3 | 24130 | 24141 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 11465945 |
| 16 | NC_001879 | TTCA | 3 | 27554 | 27564 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_001879 | CTAT | 3 | 30629 | 30640 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 18 | NC_001879 | TTAA | 3 | 30758 | 30768 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11465948 |
| 19 | NC_001879 | TTTA | 3 | 31113 | 31124 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 20 | NC_001879 | TTCT | 3 | 32825 | 32835 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_001879 | AAAG | 3 | 32975 | 32986 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 22 | NC_001879 | TGAA | 3 | 33421 | 33431 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 23 | NC_001879 | CTTT | 3 | 37001 | 37011 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_001879 | AAAT | 3 | 37393 | 37403 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465951 |
| 25 | NC_001879 | TATT | 3 | 38163 | 38174 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 26 | NC_001879 | AATG | 3 | 41876 | 41887 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 81238326 |
| 27 | NC_001879 | TTTA | 3 | 43631 | 43642 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_001879 | AAGG | 3 | 48428 | 48438 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 29 | NC_001879 | TCTT | 3 | 53071 | 53081 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_001879 | TTAT | 3 | 59457 | 59468 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_001879 | TTTA | 3 | 59534 | 59545 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_001879 | TAAA | 3 | 59628 | 59640 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 33 | NC_001879 | AATA | 4 | 65982 | 65996 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 34 | NC_001879 | CAAA | 3 | 66298 | 66309 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 11465971 |
| 35 | NC_001879 | TTTC | 3 | 67343 | 67353 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 11465976 |
| 36 | NC_001879 | AAAT | 3 | 69321 | 69332 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_001879 | AAAT | 3 | 70415 | 70426 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 38 | NC_001879 | AAAC | 3 | 70510 | 70521 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 39 | NC_001879 | TGAA | 3 | 71415 | 71426 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_001879 | TTCC | 3 | 72124 | 72134 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 41 | NC_001879 | GGTT | 3 | 75966 | 75977 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 59430010 |
| 42 | NC_001879 | CTTT | 3 | 82550 | 82560 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 59430010 |
| 43 | NC_001879 | ACTT | 3 | 84594 | 84604 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 59430010 |
| 44 | NC_001879 | CAAT | 3 | 85312 | 85322 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 59430010 |
| 45 | NC_001879 | AATA | 3 | 94267 | 94279 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 59430010 |
| 46 | NC_001879 | ATCC | 3 | 104856 | 104867 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 59430011 |
| 47 | NC_001879 | AAGG | 3 | 105149 | 105159 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 59430011 |
| 48 | NC_001879 | GAGG | 3 | 107773 | 107784 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 59430011 |
| 49 | NC_001879 | AGGT | 3 | 107985 | 107996 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 59430011 |
| 50 | NC_001879 | TAAG | 3 | 109105 | 109115 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 59430011 |
| 51 | NC_001879 | GGAA | 3 | 111183 | 111193 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 59430011 |
| 52 | NC_001879 | GTTT | 3 | 112883 | 112893 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 59430011 |
| 53 | NC_001879 | AAAT | 3 | 113620 | 113630 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 59430011 |
| 54 | NC_001879 | GAAA | 3 | 117577 | 117588 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 59430011 |
| 55 | NC_001879 | ATGA | 3 | 119476 | 119487 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 59430011 |
| 56 | NC_001879 | TTGA | 3 | 119669 | 119680 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 59430011 |
| 57 | NC_001879 | AAAG | 3 | 122682 | 122692 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 59430011 |
| 58 | NC_001879 | AATT | 3 | 126024 | 126036 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 59430011 |
| 59 | NC_001879 | TTTA | 3 | 126834 | 126845 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 59430011 |
| 60 | NC_001879 | AAAG | 4 | 129285 | 129299 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 59430011 |
| 61 | NC_001879 | TTCT | 3 | 129733 | 129743 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 59430011 |
| 62 | NC_001879 | CTTT | 3 | 130185 | 130195 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 59430011 |
| 63 | NC_001879 | TTCC | 3 | 131437 | 131447 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 59430011 |
| 64 | NC_001879 | CTTA | 3 | 133515 | 133525 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 59430011 |
| 65 | NC_001879 | CCTT | 3 | 137471 | 137481 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 59430011 |
| 66 | NC_001879 | GGAT | 3 | 137763 | 137774 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 59430011 |
| 67 | NC_001879 | TATT | 3 | 148351 | 148363 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 11466033 |
| 68 | NC_001879 | TGAT | 3 | 149353 | 149365 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 11466033 |
| 69 | NC_001879 | GATC | 3 | 149380 | 149390 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 11466033 |
| 70 | NC_001879 | ATTT | 3 | 152133 | 152144 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11466033 |