Tetra-nucleotide Imperfect Repeats of Cyanidium caldarium chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_001840 | GTGG | 4 | 71 | 86 | 16 | 0 % | 25 % | 75 % | 0 % | 6 % | Non-Coding |
| 2 | NC_001840 | GAAA | 3 | 98 | 108 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 3 | NC_001840 | TATT | 3 | 201 | 212 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 4 | NC_001840 | AATA | 3 | 247 | 258 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 5 | NC_001840 | ATTT | 3 | 369 | 380 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_001840 | ATAA | 3 | 435 | 446 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_001840 | AAAT | 3 | 3127 | 3137 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 92087138 |
| 8 | NC_001840 | AAAT | 3 | 4028 | 4038 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465586 |
| 9 | NC_001840 | TTTA | 3 | 5798 | 5808 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465583 |
| 10 | NC_001840 | ATTT | 3 | 7775 | 7786 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_001840 | CGAG | 3 | 14903 | 14913 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | 11465575 |
| 12 | NC_001840 | AAAT | 3 | 17291 | 17301 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465575 |
| 13 | NC_001840 | AAAT | 3 | 18682 | 18693 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465573 |
| 14 | NC_001840 | TTTG | 3 | 19806 | 19816 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 11465571 |
| 15 | NC_001840 | TAAA | 3 | 20319 | 20330 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465570 |
| 16 | NC_001840 | AGAA | 3 | 20341 | 20352 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11465570 |
| 17 | NC_001840 | GTTT | 3 | 23293 | 23304 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 11465566 |
| 18 | NC_001840 | TTTC | 3 | 23644 | 23655 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 19 | NC_001840 | ACTT | 3 | 24937 | 24948 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 11465560 |
| 20 | NC_001840 | AAGA | 3 | 25410 | 25420 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 11465559 |
| 21 | NC_001840 | GAAA | 3 | 28424 | 28435 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11465556 |
| 22 | NC_001840 | TTAC | 3 | 28532 | 28542 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11465556 |
| 23 | NC_001840 | TAAT | 3 | 29512 | 29522 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_001840 | TAAC | 3 | 29680 | 29690 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11465555 |
| 25 | NC_001840 | AATT | 3 | 30300 | 30310 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11465553 |
| 26 | NC_001840 | AAAT | 3 | 32130 | 32141 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465551 |
| 27 | NC_001840 | TAAA | 5 | 33881 | 33901 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465549 |
| 28 | NC_001840 | CAAA | 3 | 33963 | 33974 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 11465549 |
| 29 | NC_001840 | TTAA | 3 | 34129 | 34139 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11465548 |
| 30 | NC_001840 | AATT | 3 | 40017 | 40028 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_001840 | TAAA | 3 | 40679 | 40690 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465590 |
| 32 | NC_001840 | TAAA | 3 | 43647 | 43658 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 33 | NC_001840 | TTTA | 3 | 44960 | 44970 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465534 |
| 34 | NC_001840 | CATT | 3 | 50805 | 50815 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11465531 |
| 35 | NC_001840 | TATT | 3 | 51122 | 51132 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465530 |
| 36 | NC_001840 | CAAA | 3 | 51205 | 51216 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 11465530 |
| 37 | NC_001840 | TTAT | 3 | 51689 | 51699 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465529 |
| 38 | NC_001840 | CTCA | 3 | 52696 | 52707 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 11465529 |
| 39 | NC_001840 | TAAT | 3 | 53281 | 53292 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 40 | NC_001840 | AGAA | 3 | 56492 | 56504 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 11465526 |
| 41 | NC_001840 | AATT | 3 | 57488 | 57498 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11465525 |
| 42 | NC_001840 | GTAA | 3 | 58872 | 58882 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11465524 |
| 43 | NC_001840 | ATTT | 3 | 60436 | 60446 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465522 |
| 44 | NC_001840 | CCTT | 3 | 66062 | 66072 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 45 | NC_001840 | ATAA | 3 | 67569 | 67580 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465517 |
| 46 | NC_001840 | CAAT | 3 | 67955 | 67966 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 11465517 |
| 47 | NC_001840 | AGTA | 3 | 71077 | 71087 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11465514 |
| 48 | NC_001840 | GAAA | 3 | 73953 | 73964 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11465508 |
| 49 | NC_001840 | AATT | 3 | 78551 | 78562 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 11465505 |
| 50 | NC_001840 | TAGC | 3 | 85107 | 85119 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 11465499 |
| 51 | NC_001840 | AAAT | 3 | 87528 | 87538 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465497 |
| 52 | NC_001840 | GACT | 3 | 88179 | 88190 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 11465497 |
| 53 | NC_001840 | ATTT | 3 | 90399 | 90409 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465495 |
| 54 | NC_001840 | ATAA | 3 | 91737 | 91747 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 55 | NC_001840 | AAAT | 3 | 91841 | 91852 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 56 | NC_001840 | ATGT | 3 | 93128 | 93139 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 11465492 |
| 57 | NC_001840 | TAAA | 3 | 96206 | 96217 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 58 | NC_001840 | CTAA | 3 | 96218 | 96229 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 59 | NC_001840 | TTTA | 3 | 101026 | 101036 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465478 |
| 60 | NC_001840 | AAAT | 4 | 104523 | 104538 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 61 | NC_001840 | AAAG | 3 | 108322 | 108333 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11465470 |
| 62 | NC_001840 | TATT | 3 | 108758 | 108769 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11465470 |
| 63 | NC_001840 | TTTA | 4 | 112354 | 112369 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 11465466 |
| 64 | NC_001840 | ATCT | 3 | 113163 | 113174 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 11465465 |
| 65 | NC_001840 | AACA | 3 | 114374 | 114384 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 66 | NC_001840 | ATTT | 3 | 115682 | 115692 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11465463 |
| 67 | NC_001840 | TAAA | 3 | 117333 | 117343 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465460 |
| 68 | NC_001840 | AGTA | 3 | 117421 | 117432 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 11465460 |
| 69 | NC_001840 | AAAT | 3 | 119740 | 119751 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 70 | NC_001840 | TTCT | 3 | 119761 | 119771 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 71 | NC_001840 | TCAA | 3 | 121719 | 121730 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 11465455 |
| 72 | NC_001840 | TTTC | 3 | 122081 | 122091 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 73 | NC_001840 | AAAC | 3 | 123083 | 123093 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 74 | NC_001840 | TGGC | 3 | 134222 | 134232 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 11465434 |
| 75 | NC_001840 | ATGA | 3 | 136798 | 136808 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11465428 |
| 76 | NC_001840 | GTTT | 3 | 138712 | 138723 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 11465424 |
| 77 | NC_001840 | TGTT | 3 | 139426 | 139436 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 11465423 |
| 78 | NC_001840 | AACT | 3 | 140318 | 140328 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11465421 |
| 79 | NC_001840 | AACA | 3 | 143355 | 143366 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 11465419 |
| 80 | NC_001840 | AATT | 3 | 145218 | 145228 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 81 | NC_001840 | ATAA | 3 | 148478 | 148489 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11465416 |
| 82 | NC_001840 | CATT | 3 | 148501 | 148511 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11465416 |
| 83 | NC_001840 | CATC | 3 | 152464 | 152476 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 11465412 |
| 84 | NC_001840 | ATAA | 3 | 155378 | 155388 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11465408 |
| 85 | NC_001840 | TTAG | 3 | 155941 | 155953 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 11465407 |
| 86 | NC_001840 | AATT | 3 | 159277 | 159288 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 87 | NC_001840 | TGTT | 3 | 163768 | 163778 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 11465395 |