Tetra-nucleotide Imperfect Repeats of Zea mays chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_001666 | AAGT | 3 | 788 | 798 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11467171 |
| 2 | NC_001666 | TTTA | 3 | 4470 | 4481 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_001666 | TTCT | 3 | 5133 | 5143 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 11467173 |
| 4 | NC_001666 | AAAT | 3 | 6107 | 6117 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_001666 | TTTA | 3 | 8845 | 8856 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_001666 | ATTT | 3 | 11515 | 11525 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_001666 | ATGA | 3 | 11594 | 11605 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_001666 | CCTT | 3 | 14377 | 14388 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 9 | NC_001666 | TAGG | 3 | 14834 | 14845 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 10 | NC_001666 | GTAT | 3 | 16965 | 16975 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 11 | NC_001666 | ATAA | 4 | 18155 | 18170 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 12 | NC_001666 | AAAG | 3 | 18624 | 18635 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_001666 | ATCA | 3 | 19216 | 19226 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_001666 | CTTT | 3 | 19567 | 19578 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_001666 | TAAA | 3 | 19911 | 19922 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_001666 | CTTT | 3 | 20264 | 20275 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 17 | NC_001666 | TAAA | 3 | 20947 | 20957 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_001666 | TTTC | 3 | 22070 | 22082 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 11467182 |
| 19 | NC_001666 | AGAA | 3 | 26668 | 26679 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11467183 |
| 20 | NC_001666 | TTCA | 3 | 29428 | 29438 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11467184 |
| 21 | NC_001666 | TTAA | 3 | 31692 | 31703 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_001666 | GAAA | 3 | 31826 | 31836 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 23 | NC_001666 | CTTT | 3 | 34662 | 34672 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_001666 | CTTT | 3 | 35058 | 35068 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 25 | NC_001666 | CATA | 3 | 35951 | 35961 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11467188 |
| 26 | NC_001666 | AAAG | 3 | 35967 | 35978 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11467188 |
| 27 | NC_001666 | AAAT | 3 | 39108 | 39119 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11467191 |
| 28 | NC_001666 | AAGA | 3 | 41590 | 41601 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11994091 |
| 29 | NC_001666 | CTAG | 3 | 42533 | 42545 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 11994091 |
| 30 | NC_001666 | ATCA | 3 | 44553 | 44563 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11467193 |
| 31 | NC_001666 | TCCT | 3 | 44968 | 44979 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 11467193 |
| 32 | NC_001666 | AAAG | 3 | 47019 | 47029 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_001666 | AGAA | 3 | 48681 | 48692 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_001666 | GAAT | 3 | 48883 | 48893 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 35 | NC_001666 | TTGA | 3 | 48999 | 49011 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 36 | NC_001666 | CTTT | 3 | 49543 | 49554 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 37 | NC_001666 | CTTT | 3 | 52365 | 52376 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_001666 | AGAA | 3 | 52525 | 52535 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_001666 | TTTA | 3 | 52733 | 52743 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_001666 | TTCT | 3 | 52973 | 52983 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_001666 | TAGG | 4 | 54087 | 54102 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 42 | NC_001666 | AATT | 3 | 56224 | 56235 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_001666 | AATA | 3 | 58521 | 58532 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_001666 | TTAT | 3 | 59268 | 59279 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11467201 |
| 45 | NC_001666 | ATTC | 3 | 61367 | 61377 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_001666 | TTTA | 3 | 68773 | 68785 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 47 | NC_001666 | AGAA | 3 | 70272 | 70283 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 11467215 |
| 48 | NC_001666 | AAAG | 3 | 70396 | 70406 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 11467215 |
| 49 | NC_001666 | ACTT | 3 | 72541 | 72551 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11467215 |
| 50 | NC_001666 | ACCG | 3 | 74068 | 74079 | 12 | 25 % | 0 % | 25 % | 50 % | 0 % | 11467215 |
| 51 | NC_001666 | AATT | 3 | 74744 | 74754 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467215 |
| 52 | NC_001666 | CTTT | 4 | 76111 | 76125 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 11467215 |
| 53 | NC_001666 | GATC | 3 | 87447 | 87458 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 11467215 |
| 54 | NC_001666 | TTCT | 3 | 92212 | 92222 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 11467215 |
| 55 | NC_001666 | TCTA | 3 | 93916 | 93927 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 56 | NC_001666 | AAAC | 3 | 97126 | 97138 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 11467247 |
| 57 | NC_001666 | ATCC | 3 | 97260 | 97271 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 11467247 |
| 58 | NC_001666 | CTAT | 3 | 97647 | 97658 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 59 | NC_001666 | ACGG | 3 | 100509 | 100520 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 60 | NC_001666 | AGGT | 3 | 100792 | 100803 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 61 | NC_001666 | AACG | 3 | 102116 | 102127 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
| 62 | NC_001666 | AAAG | 4 | 103446 | 103461 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 63 | NC_001666 | ATTG | 3 | 107643 | 107654 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 64 | NC_001666 | GCAA | 3 | 108288 | 108298 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 11467253 |
| 65 | NC_001666 | AGAT | 3 | 110050 | 110061 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 66 | NC_001666 | ATTG | 3 | 112488 | 112500 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 11467257 |
| 67 | NC_001666 | TTTA | 3 | 112935 | 112946 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 68 | NC_001666 | AATC | 3 | 115672 | 115683 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 11467260 |
| 69 | NC_001666 | ATCC | 3 | 117119 | 117130 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 11467261 |
| 70 | NC_001666 | AAAT | 3 | 118064 | 118074 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 71 | NC_001666 | CTTT | 4 | 119276 | 119291 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 72 | NC_001666 | TCGT | 3 | 120609 | 120620 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | Non-Coding |
| 73 | NC_001666 | CTTA | 3 | 120816 | 120826 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 74 | NC_001666 | CCGT | 3 | 122217 | 122228 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | Non-Coding |
| 75 | NC_001666 | AGAA | 3 | 124984 | 124994 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 76 | NC_001666 | AGGA | 3 | 125242 | 125253 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 11467266 |
| 77 | NC_001666 | GGAT | 3 | 125466 | 125477 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 11467266 |
| 78 | NC_001666 | AGAA | 3 | 130515 | 130525 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 11467269 |
| 79 | NC_001666 | TGAA | 3 | 137171 | 137182 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 11467274 |