Tetra-nucleotide Imperfect Repeats of Pinus thunbergii chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_001631 | GATG | 3 | 1540 | 1552 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
| 2 | NC_001631 | TCTA | 3 | 3382 | 3392 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 3 | NC_001631 | ATGA | 3 | 4280 | 4291 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 4 | NC_001631 | CCTT | 3 | 6146 | 6156 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 7524597 |
| 5 | NC_001631 | ATGT | 3 | 6896 | 6906 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_001631 | CTTT | 3 | 7219 | 7229 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 7 | NC_001631 | TTTA | 3 | 10178 | 10188 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 7524606 |
| 8 | NC_001631 | ATTT | 3 | 12874 | 12886 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 7524607 |
| 9 | NC_001631 | AAAT | 3 | 15137 | 15148 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 7524611 |
| 10 | NC_001631 | ATGA | 3 | 26172 | 26183 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_001631 | ATCC | 3 | 26418 | 26428 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 12 | NC_001631 | TAGA | 3 | 33074 | 33084 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 7524627 |
| 13 | NC_001631 | TTTA | 3 | 41453 | 41464 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 7524627 |
| 14 | NC_001631 | GATA | 3 | 42908 | 42919 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 7524627 |
| 15 | NC_001631 | ATTT | 3 | 45032 | 45042 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 7524627 |
| 16 | NC_001631 | GAAA | 3 | 48878 | 48889 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 7524627 |
| 17 | NC_001631 | GAAA | 3 | 49691 | 49701 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 7524627 |
| 18 | NC_001631 | GAAG | 3 | 50913 | 50924 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 7524627 |
| 19 | NC_001631 | TCTA | 3 | 51050 | 51061 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 7524627 |
| 20 | NC_001631 | ATTC | 3 | 52844 | 52855 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 7524627 |
| 21 | NC_001631 | TCGT | 3 | 61292 | 61302 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 7524627 |
| 22 | NC_001631 | AATT | 3 | 64880 | 64890 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 7524627 |
| 23 | NC_001631 | AAAT | 3 | 68312 | 68323 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 7524627 |
| 24 | NC_001631 | TTCT | 4 | 69481 | 69495 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 7524627 |
| 25 | NC_001631 | AATT | 3 | 79259 | 79269 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 7524627 |
| 26 | NC_001631 | TTTC | 3 | 81100 | 81111 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 7524627 |
| 27 | NC_001631 | GATC | 3 | 82756 | 82767 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 7524627 |
| 28 | NC_001631 | ATCC | 3 | 86521 | 86532 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 7524627 |
| 29 | NC_001631 | GTTG | 3 | 87184 | 87195 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 7524627 |
| 30 | NC_001631 | GAGG | 3 | 89792 | 89803 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 7524627 |
| 31 | NC_001631 | AGGT | 3 | 90000 | 90011 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 7524627 |
| 32 | NC_001631 | CTAT | 3 | 91395 | 91406 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 7524627 |
| 33 | NC_001631 | AACC | 3 | 91624 | 91636 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 7524627 |
| 34 | NC_001631 | ATGG | 3 | 100434 | 100445 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 7524627 |
| 35 | NC_001631 | TTCT | 3 | 101081 | 101091 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 7524627 |
| 36 | NC_001631 | TTCT | 3 | 101454 | 101464 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 7524627 |
| 37 | NC_001631 | TCCA | 3 | 104932 | 104943 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 7524627 |
| 38 | NC_001631 | TTCA | 3 | 107665 | 107676 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 7524627 |
| 39 | NC_001631 | TTGA | 3 | 108164 | 108174 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 7524627 |
| 40 | NC_001631 | AAAG | 3 | 110312 | 110323 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 7524627 |
| 41 | NC_001631 | TCTA | 3 | 111041 | 111052 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 42 | NC_001631 | AAAG | 3 | 111142 | 111152 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 43 | NC_001631 | TGAG | 3 | 114687 | 114699 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 7524751 |
| 44 | NC_001631 | TCAA | 3 | 116602 | 116612 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 7524751 |
| 45 | NC_001631 | TTGA | 3 | 118518 | 118528 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 7524751 |