Tetra-nucleotide Imperfect Repeats of Epifagus virginiana chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_001568 | TAAT | 6 | 319 | 341 | 23 | 50 % | 50 % | 0 % | 0 % | 4 % | Non-Coding |
| 2 | NC_001568 | AATT | 3 | 1721 | 1732 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 11466955 |
| 3 | NC_001568 | TAAA | 3 | 2574 | 2585 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_001568 | ATCA | 3 | 3618 | 3628 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11466956 |
| 5 | NC_001568 | TAAA | 3 | 3859 | 3869 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_001568 | TTTA | 3 | 4943 | 4954 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_001568 | ATTT | 3 | 6165 | 6176 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_001568 | TTAT | 3 | 6273 | 6284 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_001568 | ATTT | 3 | 8492 | 8503 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 11466959 |
| 10 | NC_001568 | AGCA | 3 | 9821 | 9832 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 11 | NC_001568 | AAAT | 3 | 10269 | 10279 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_001568 | GAAA | 3 | 10995 | 11006 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 11466960 |
| 13 | NC_001568 | AAAT | 3 | 11398 | 11408 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11466961 |
| 14 | NC_001568 | TATT | 4 | 12490 | 12505 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 15 | NC_001568 | ATTT | 3 | 12557 | 12567 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_001568 | ATTT | 3 | 13489 | 13499 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11466974 |
| 17 | NC_001568 | ATAA | 3 | 13958 | 13969 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 11466974 |
| 18 | NC_001568 | TAAT | 3 | 14474 | 14484 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11466974 |
| 19 | NC_001568 | TTTA | 3 | 14865 | 14877 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 11466974 |
| 20 | NC_001568 | TAGA | 3 | 16382 | 16392 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11466974 |
| 21 | NC_001568 | ATAA | 5 | 17007 | 17027 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | 11466974 |
| 22 | NC_001568 | AAAT | 3 | 17466 | 17476 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11466974 |
| 23 | NC_001568 | CTTT | 3 | 18410 | 18420 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 11466974 |
| 24 | NC_001568 | AATT | 3 | 18710 | 18720 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11466974 |
| 25 | NC_001568 | TACT | 3 | 21758 | 21768 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11466974 |
| 26 | NC_001568 | AAAT | 3 | 22334 | 22344 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11466974 |
| 27 | NC_001568 | TATT | 3 | 23805 | 23816 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 11466974 |
| 28 | NC_001568 | AAAT | 3 | 25600 | 25611 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11466974 |
| 29 | NC_001568 | CCAA | 3 | 28906 | 28917 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 11466974 |
| 30 | NC_001568 | AATA | 4 | 29892 | 29906 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 11466974 |
| 31 | NC_001568 | TTAT | 3 | 31314 | 31324 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11466974 |
| 32 | NC_001568 | TTTG | 3 | 33164 | 33174 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 59374957 |
| 33 | NC_001568 | AGGT | 3 | 38804 | 38815 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 59374957 |
| 34 | NC_001568 | TAAG | 3 | 39911 | 39921 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 59374957 |
| 35 | NC_001568 | GGAA | 3 | 41880 | 41890 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 59374957 |
| 36 | NC_001568 | AAAT | 3 | 42653 | 42663 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 59374957 |
| 37 | NC_001568 | TATT | 3 | 43257 | 43267 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 59374957 |
| 38 | NC_001568 | GTTT | 3 | 43269 | 43279 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 59374957 |
| 39 | NC_001568 | ATTT | 4 | 44829 | 44844 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 59374957 |
| 40 | NC_001568 | TTCC | 3 | 47938 | 47948 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 59374957 |
| 41 | NC_001568 | AATT | 3 | 48687 | 48697 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 59374957 |
| 42 | NC_001568 | ATTT | 3 | 48791 | 48802 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 59374957 |
| 43 | NC_001568 | CTTA | 3 | 49907 | 49917 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 59374957 |
| 44 | NC_001568 | CTTA | 3 | 52693 | 52703 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 59374957 |
| 45 | NC_001568 | TAAA | 3 | 52714 | 52724 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 59374957 |
| 46 | NC_001568 | AATA | 3 | 57484 | 57495 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 59374957 |
| 47 | NC_001568 | TATT | 4 | 59922 | 59936 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 48 | NC_001568 | ATCT | 3 | 60530 | 60542 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 49 | NC_001568 | TTGT | 3 | 60907 | 60918 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 50 | NC_001568 | TCCT | 3 | 61072 | 61083 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 51 | NC_001568 | TATT | 3 | 62605 | 62617 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 11466978 |
| 52 | NC_001568 | AAAT | 4 | 66011 | 66026 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 11466978 |
| 53 | NC_001568 | TTTG | 3 | 66928 | 66938 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 11466978 |
| 54 | NC_001568 | ACAT | 3 | 67998 | 68009 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 55 | NC_001568 | AGTA | 3 | 68060 | 68070 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 56 | NC_001568 | ACAT | 3 | 68316 | 68328 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 57 | NC_001568 | AAAT | 3 | 69858 | 69869 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11466979 |
| 58 | NC_001568 | AATA | 3 | 69949 | 69959 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |