All Imperfect Repeats of Guillardia theta chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_000926 | ATTG | 3 | 1899 | 1911 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 11467609 |
2 | NC_000926 | GGC | 4 | 2733 | 2744 | 12 | 0 % | 0 % | 66.67 % | 33.33 % | 8 % | 11467609 |
3 | NC_000926 | GAT | 4 | 3129 | 3140 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 11467609 |
4 | NC_000926 | AAAT | 3 | 4775 | 4786 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11467610 |
5 | NC_000926 | TTGA | 3 | 5070 | 5082 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 11467610 |
6 | NC_000926 | TATAT | 4 | 5509 | 5529 | 21 | 40 % | 60 % | 0 % | 0 % | 9 % | Non-Coding |
7 | NC_000926 | CTG | 4 | 6910 | 6921 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 11467613 |
8 | NC_000926 | TTTAAT | 3 | 8432 | 8450 | 19 | 33.33 % | 66.67 % | 0 % | 0 % | 10 % | Non-Coding |
9 | NC_000926 | ATT | 4 | 8795 | 8805 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 11467616 |
10 | NC_000926 | AACA | 3 | 9070 | 9081 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 11467616 |
11 | NC_000926 | ATT | 4 | 10079 | 10089 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_000926 | TAAA | 3 | 10132 | 10143 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
13 | NC_000926 | AAC | 5 | 10409 | 10423 | 15 | 66.67 % | 0 % | 0 % | 33.33 % | 6 % | 11467618 |
14 | NC_000926 | TCAT | 3 | 12301 | 12311 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 11467620 |
15 | NC_000926 | TAA | 4 | 13034 | 13044 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11467623 |
16 | NC_000926 | GCT | 4 | 13700 | 13711 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 126165886 |
17 | NC_000926 | TAA | 4 | 14529 | 14541 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 126165886 |
18 | NC_000926 | ATA | 4 | 15787 | 15798 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467626 |
19 | NC_000926 | TCA | 4 | 16900 | 16911 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 11467627 |
20 | NC_000926 | AGCG | 3 | 19196 | 19206 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
21 | NC_000926 | TTAA | 3 | 22115 | 22126 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 11467628 |
22 | NC_000926 | TAAT | 4 | 22347 | 22363 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | 11467628 |
23 | NC_000926 | TAA | 4 | 22933 | 22944 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467630 |
24 | NC_000926 | TAA | 4 | 23518 | 23530 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 11467631 |
25 | NC_000926 | ATTG | 3 | 23742 | 23752 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 11467631 |
26 | NC_000926 | AAC | 4 | 24388 | 24399 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 0 % | Non-Coding |
27 | NC_000926 | TTTA | 3 | 25579 | 25590 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11467635 |
28 | NC_000926 | TAA | 4 | 27386 | 27396 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11467636 |
29 | NC_000926 | ATA | 4 | 27414 | 27425 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
30 | NC_000926 | TTAA | 3 | 27848 | 27859 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 11467637 |
31 | NC_000926 | ATT | 4 | 27951 | 27961 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 11467637 |
32 | NC_000926 | TGAAAA | 3 | 28156 | 28173 | 18 | 66.67 % | 16.67 % | 16.67 % | 0 % | 5 % | Non-Coding |
33 | NC_000926 | TTTA | 3 | 29087 | 29098 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11467638 |
34 | NC_000926 | TA | 6 | 30005 | 30015 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467640 |
35 | NC_000926 | TCA | 4 | 30563 | 30574 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 11467640 |
36 | NC_000926 | ATA | 4 | 30592 | 30603 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467640 |
37 | NC_000926 | TAA | 4 | 31731 | 31741 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11467640 |
38 | NC_000926 | TTTA | 3 | 31946 | 31957 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11467640 |
39 | NC_000926 | GTTCT | 3 | 32514 | 32527 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 11467640 |
40 | NC_000926 | TA | 7 | 32928 | 32940 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
41 | NC_000926 | AATTT | 4 | 33644 | 33663 | 20 | 40 % | 60 % | 0 % | 0 % | 10 % | 11467644 |
42 | NC_000926 | CAAT | 3 | 35431 | 35441 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11467646 |
43 | NC_000926 | TTA | 4 | 35457 | 35468 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11467646 |
44 | NC_000926 | TCT | 4 | 36029 | 36039 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11467647 |
45 | NC_000926 | TTAT | 3 | 36934 | 36945 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
46 | NC_000926 | AAAC | 3 | 43396 | 43407 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 11467650 |
47 | NC_000926 | TTAACA | 3 | 43953 | 43970 | 18 | 50 % | 33.33 % | 0 % | 16.67 % | 5 % | Non-Coding |
48 | NC_000926 | AT | 8 | 44215 | 44229 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
49 | NC_000926 | AAATAA | 3 | 44248 | 44265 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | Non-Coding |
50 | NC_000926 | ACA | 4 | 44365 | 44376 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 11467651 |
51 | NC_000926 | TTAA | 4 | 45908 | 45923 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 11467652 |
52 | NC_000926 | TA | 6 | 46100 | 46111 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
53 | NC_000926 | ATAA | 4 | 46127 | 46142 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
54 | NC_000926 | TGC | 7 | 46986 | 47006 | 21 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 11467653 |
55 | NC_000926 | TAA | 4 | 47818 | 47828 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
56 | NC_000926 | TTAT | 5 | 48302 | 48320 | 19 | 25 % | 75 % | 0 % | 0 % | 10 % | Non-Coding |
57 | NC_000926 | AAT | 4 | 48335 | 48346 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
58 | NC_000926 | TAAA | 3 | 49235 | 49245 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11467655 |
59 | NC_000926 | GTT | 4 | 49817 | 49827 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 11467656 |
60 | NC_000926 | TACA | 3 | 50515 | 50525 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 11467657 |
61 | NC_000926 | T | 14 | 50540 | 50553 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
62 | NC_000926 | ATA | 4 | 51932 | 51943 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467658 |
63 | NC_000926 | TAA | 4 | 52620 | 52630 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
64 | NC_000926 | ATAA | 3 | 52700 | 52712 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
65 | NC_000926 | CAA | 4 | 52793 | 52803 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 11467660 |
66 | NC_000926 | AATC | 3 | 53090 | 53101 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
67 | NC_000926 | T | 19 | 53892 | 53910 | 19 | 0 % | 100 % | 0 % | 0 % | 5 % | Non-Coding |
68 | NC_000926 | AAAG | 3 | 53937 | 53947 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
69 | NC_000926 | ATA | 4 | 54249 | 54259 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11467663 |
70 | NC_000926 | ATAA | 3 | 54401 | 54412 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11467663 |
71 | NC_000926 | A | 12 | 55072 | 55083 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | 11467664 |
72 | NC_000926 | AATT | 4 | 55213 | 55229 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | 11467664 |
73 | NC_000926 | AT | 6 | 55329 | 55339 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467665 |
74 | NC_000926 | ATAA | 3 | 56107 | 56118 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11467668 |
75 | NC_000926 | AT | 6 | 56192 | 56202 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467668 |
76 | NC_000926 | ATTG | 3 | 56416 | 56428 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 11467670 |
77 | NC_000926 | TTTCT | 3 | 57537 | 57550 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 11467672 |
78 | NC_000926 | ATA | 4 | 58114 | 58125 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
79 | NC_000926 | CTT | 4 | 58207 | 58217 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 11467674 |
80 | NC_000926 | TTTTAT | 3 | 59830 | 59847 | 18 | 16.67 % | 83.33 % | 0 % | 0 % | 0 % | 11467677 |
81 | NC_000926 | AAT | 4 | 60079 | 60090 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467677 |
82 | NC_000926 | AGTT | 3 | 61353 | 61364 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 11467678 |
83 | NC_000926 | AATA | 3 | 62920 | 62931 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11467679 |
84 | NC_000926 | ACC | 4 | 63968 | 63979 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 11467680 |
85 | NC_000926 | AAC | 4 | 64682 | 64693 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 11467680 |
86 | NC_000926 | TAAT | 3 | 66282 | 66292 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467683 |
87 | NC_000926 | AATC | 3 | 66504 | 66515 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 11467683 |
88 | NC_000926 | TA | 6 | 66550 | 66560 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467683 |
89 | NC_000926 | TTTC | 3 | 68997 | 69007 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 11467687 |
90 | NC_000926 | ATT | 4 | 70158 | 70169 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11467688 |
91 | NC_000926 | ATTT | 3 | 71104 | 71115 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11467688 |
92 | NC_000926 | GTT | 4 | 71470 | 71480 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 11467688 |
93 | NC_000926 | ATT | 4 | 72133 | 72144 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11467688 |
94 | NC_000926 | AAT | 4 | 72609 | 72619 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11467688 |
95 | NC_000926 | TACT | 3 | 72901 | 72912 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 11467688 |
96 | NC_000926 | ATT | 4 | 73272 | 73284 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 11467689 |
97 | NC_000926 | TTC | 4 | 73439 | 73451 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 11467689 |
98 | NC_000926 | TCA | 5 | 73452 | 73469 | 18 | 33.33 % | 33.33 % | 0 % | 33.33 % | 5 % | 11467689 |
99 | NC_000926 | TTTA | 3 | 73953 | 73965 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 11467689 |
100 | NC_000926 | TAA | 4 | 78126 | 78136 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 11467690 |
101 | NC_000926 | TAA | 4 | 78524 | 78535 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
102 | NC_000926 | ATT | 4 | 78749 | 78760 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11467691 |
103 | NC_000926 | TAAA | 3 | 79190 | 79201 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 11467692 |
104 | NC_000926 | TTAT | 3 | 80159 | 80170 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 11467694 |
105 | NC_000926 | TTTG | 3 | 81581 | 81592 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 11467694 |
106 | NC_000926 | GTC | 4 | 81658 | 81668 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 11467694 |
107 | NC_000926 | TA | 7 | 82067 | 82079 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 11467695 |
108 | NC_000926 | TAT | 4 | 84462 | 84472 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 11467698 |
109 | NC_000926 | CTAGTT | 3 | 85195 | 85211 | 17 | 16.67 % | 50 % | 16.67 % | 16.67 % | 5 % | 11467698 |
110 | NC_000926 | TTTCTT | 3 | 86850 | 86867 | 18 | 0 % | 83.33 % | 0 % | 16.67 % | 5 % | 11467701 |
111 | NC_000926 | AATT | 3 | 87982 | 87994 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
112 | NC_000926 | TATT | 3 | 88456 | 88466 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 11467705 |
113 | NC_000926 | TA | 6 | 88772 | 88783 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 11467706 |
114 | NC_000926 | CTAT | 3 | 89019 | 89029 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
115 | NC_000926 | AAAT | 3 | 90949 | 90961 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 11467710 |
116 | NC_000926 | TTA | 4 | 91403 | 91414 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
117 | NC_000926 | TAA | 4 | 93228 | 93239 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467712 |
118 | NC_000926 | AGC | 4 | 94717 | 94728 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 11467713 |
119 | NC_000926 | ACT | 4 | 97705 | 97716 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 11467716 |
120 | NC_000926 | T | 15 | 98840 | 98854 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | Non-Coding |
121 | NC_000926 | TAA | 4 | 99938 | 99949 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467718 |
122 | NC_000926 | AAGT | 3 | 100385 | 100395 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11467719 |
123 | NC_000926 | AAATT | 3 | 100518 | 100531 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 11467719 |
124 | NC_000926 | TGG | 4 | 101235 | 101246 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 11467720 |
125 | NC_000926 | AATA | 3 | 102767 | 102778 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
126 | NC_000926 | TAATTC | 3 | 104157 | 104175 | 19 | 33.33 % | 50 % | 0 % | 16.67 % | 10 % | 11467728 |
127 | NC_000926 | ATAA | 3 | 104198 | 104208 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11467728 |
128 | NC_000926 | TTAATT | 3 | 104938 | 104955 | 18 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | 11467729 |
129 | NC_000926 | TAT | 4 | 105791 | 105802 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11467731 |
130 | NC_000926 | TAT | 4 | 106428 | 106439 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 11467733 |
131 | NC_000926 | AAGT | 3 | 108182 | 108192 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 11467735 |
132 | NC_000926 | GAAT | 3 | 108594 | 108605 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 11467736 |
133 | NC_000926 | ACGT | 3 | 109321 | 109331 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 11467738 |
134 | NC_000926 | AT | 7 | 110820 | 110832 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 11467740 |
135 | NC_000926 | TA | 6 | 111042 | 111052 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 11467741 |
136 | NC_000926 | TGA | 4 | 112703 | 112714 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 11467744 |
137 | NC_000926 | TAC | 4 | 113069 | 113080 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 11467744 |
138 | NC_000926 | CA | 6 | 113209 | 113219 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | 11467744 |
139 | NC_000926 | TATTGA | 3 | 113805 | 113822 | 18 | 33.33 % | 50 % | 16.67 % | 0 % | 5 % | 11467745 |
140 | NC_000926 | ACTT | 3 | 114279 | 114289 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
141 | NC_000926 | ATATA | 3 | 114291 | 114305 | 15 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |
142 | NC_000926 | AAAG | 3 | 114408 | 114419 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
143 | NC_000926 | AATA | 3 | 116003 | 116014 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
144 | NC_000926 | AT | 6 | 116161 | 116171 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
145 | NC_000926 | TTAT | 3 | 116349 | 116359 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
146 | NC_000926 | AAAT | 3 | 118137 | 118147 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 11467752 |
147 | NC_000926 | TATT | 3 | 119777 | 119789 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
148 | NC_000926 | TAA | 4 | 121226 | 121237 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 11467754 |