List of
Perfect Tri
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884682 | GCT | 5 | 21793 | 21807 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 317158536 |
| 2. | NW_001884682 | ATT | 5 | 32384 | 32398 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001884682 | GGA | 9 | 45762 | 45788 | 27 | 33.33% | 0.00% | 66.67% | 0.00% | 317158548 |
| 4. | NW_001884682 | AGG | 5 | 194786 | 194800 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 5. | NW_001884682 | CAT | 4 | 223556 | 223567 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317158635 |
| 6. | NW_001884682 | TCA | 4 | 425807 | 425818 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001884682 | GGT | 4 | 435415 | 435426 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 169785491 |
| 8. | NW_001884682 | TTA | 4 | 486029 | 486040 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001884682 | AGA | 4 | 510092 | 510103 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 169785533 |
| 10. | NW_001884682 | AGA | 4 | 526465 | 526476 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 169785543 |
| 11. | NW_001884682 | CTT | 4 | 530785 | 530796 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 169785547 |
| 12. | NW_001884682 | CAG | 4 | 531767 | 531778 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 169785547 |
| 13. | NW_001884682 | AGC | 4 | 531780 | 531791 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 169785547 |
| 14. | NW_001884682 | CAA | 6 | 552242 | 552259 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | 317158768 |
| 15. | NW_001884682 | GTC | 5 | 651787 | 651801 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 16. | NW_001884682 | CTC | 12 | 667600 | 667635 | 36 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 17. | NW_001884682 | TCC | 4 | 667637 | 667648 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 18. | NW_001884682 | ATT | 4 | 671151 | 671162 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001884682 | AGA | 4 | 677406 | 677417 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001884682 | TGC | 4 | 691778 | 691789 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 21. | NW_001884682 | GCA | 4 | 771677 | 771688 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 22. | NW_001884682 | CGC | 4 | 779698 | 779709 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317159424 |
| 23. | NW_001884682 | GAT | 4 | 783968 | 783979 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 24. | NW_001884682 | GGT | 4 | 791347 | 791358 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317159428 |
| 25. | NW_001884682 | ACC | 4 | 801747 | 801758 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 317159432 |
| 26. | NW_001884682 | ATG | 5 | 804841 | 804855 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001884682 | ATC | 6 | 845328 | 845345 | 18 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001884682 | ACC | 4 | 853904 | 853915 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 317159444 |
| 29. | NW_001884682 | GCG | 4 | 900606 | 900617 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 317159456 |
| 30. | NW_001884682 | GAG | 4 | 938666 | 938677 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 317158841 |
| 31. | NW_001884682 | TAT | 4 | 964285 | 964296 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 317159464 |
| 32. | NW_001884682 | GTG | 4 | 990227 | 990238 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 169785809 |
| 33. | NW_001884682 | GAT | 4 | 1048384 | 1048395 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 317158895 |
| 34. | NW_001884682 | CTT | 4 | 1113738 | 1113749 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 169785895 |
| 35. | NW_001884682 | CAA | 5 | 1129422 | 1129436 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 36. | NW_001884682 | TAT | 4 | 1156526 | 1156537 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001884682 | AGC | 4 | 1165019 | 1165030 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 38. | NW_001884682 | CTC | 4 | 1182708 | 1182719 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317158952 |
| 39. | NW_001884682 | CAT | 5 | 1243423 | 1243437 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 169785979 |
| 40. | NW_001884682 | TGT | 4 | 1278055 | 1278066 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 317158997 |
| 41. | NW_001884682 | ACC | 4 | 1292272 | 1292283 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 169786011 |
| 42. | NW_001884682 | AAG | 4 | 1354941 | 1354952 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 43. | NW_001884682 | AGT | 87 | 1533893 | 1534153 | 261 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001884682 | GGT | 8 | 1534154 | 1534177 | 24 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 45. | NW_001884682 | TAT | 4 | 1720965 | 1720976 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 169786313 |
| 46. | NW_001884682 | AGT | 4 | 1931279 | 1931290 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 47. | NW_001884682 | ATA | 5 | 1931417 | 1931431 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001884682 | CCA | 4 | 1942036 | 1942047 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 49. | NW_001884682 | AGA | 4 | 1957155 | 1957166 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 50. | NW_001884682 | CTC | 4 | 1997127 | 1997138 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 51. | NW_001884682 | AGA | 5 | 2008821 | 2008835 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |