List of
Imperfect Hexa
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884682 | TGCTGA | 3 | 19918 | 19936 | 19 | 16.67% | 33.33% | 33.33% | 16.67% | 169785203 |
| 2. | NW_001884682 | TATTTT | 3 | 31839 | 31856 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001884682 | GCCGGC | 3 | 149593 | 149610 | 18 | 0.00% | 0.00% | 50.00% | 50.00% | 317158593 |
| 4. | NW_001884682 | TTTCTT | 3 | 182995 | 183013 | 19 | 0.00% | 83.33% | 0.00% | 16.67% | 169785321 |
| 5. | NW_001884682 | TTTTAT | 4 | 215983 | 216005 | 23 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001884682 | TCTTTC | 3 | 218772 | 218789 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001884682 | CTAGTA | 3 | 293535 | 293553 | 19 | 33.33% | 33.33% | 16.67% | 16.67% | Non-Coding |
| 8. | NW_001884682 | CTTTGT | 3 | 296773 | 296790 | 18 | 0.00% | 66.67% | 16.67% | 16.67% | Non-Coding |
| 9. | NW_001884682 | AAAAGA | 4 | 308562 | 308585 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 10. | NW_001884682 | TTAGAT | 4 | 367025 | 367047 | 23 | 33.33% | 50.00% | 16.67% | 0.00% | Non-Coding |
| 11. | NW_001884682 | AAAGAA | 4 | 423557 | 423580 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 12. | NW_001884682 | AAAAGA | 4 | 430225 | 430247 | 23 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 13. | NW_001884682 | TGAGTT | 3 | 483342 | 483359 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | 317158743 |
| 14. | NW_001884682 | CCCATA | 3 | 491733 | 491751 | 19 | 33.33% | 16.67% | 0.00% | 50.00% | Non-Coding |
| 15. | NW_001884682 | CTTTTT | 4 | 493826 | 493849 | 24 | 0.00% | 83.33% | 0.00% | 16.67% | 317158749 |
| 16. | NW_001884682 | AAAGAA | 7 | 526242 | 526282 | 41 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 17. | NW_001884682 | ATCCAC | 4 | 526513 | 526536 | 24 | 33.33% | 16.67% | 0.00% | 50.00% | 169785543 |
| 18. | NW_001884682 | TGGGGC | 3 | 549350 | 549367 | 18 | 0.00% | 16.67% | 66.67% | 16.67% | 317158766 |
| 19. | NW_001884682 | AAGCAA | 3 | 552467 | 552483 | 17 | 66.67% | 0.00% | 16.67% | 16.67% | 317158768 |
| 20. | NW_001884682 | CACAAC | 3 | 582057 | 582074 | 18 | 50.00% | 0.00% | 0.00% | 50.00% | 317158784 |
| 21. | NW_001884682 | GGAACA | 3 | 582984 | 583001 | 18 | 50.00% | 0.00% | 33.33% | 16.67% | Non-Coding |
| 22. | NW_001884682 | CCACGG | 4 | 590788 | 590811 | 24 | 16.67% | 0.00% | 33.33% | 50.00% | 169785585 |
| 23. | NW_001884682 | CGGGTT | 4 | 619646 | 619669 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | Non-Coding |
| 24. | NW_001884682 | GAGGCC | 3 | 624479 | 624496 | 18 | 16.67% | 0.00% | 50.00% | 33.33% | Non-Coding |
| 25. | NW_001884682 | GGGCGG | 3 | 654367 | 654384 | 18 | 0.00% | 0.00% | 83.33% | 16.67% | Non-Coding |
| 26. | NW_001884682 | CGGGTT | 3 | 655072 | 655089 | 18 | 0.00% | 33.33% | 50.00% | 16.67% | Non-Coding |
| 27. | NW_001884682 | TGCGTG | 3 | 728051 | 728068 | 18 | 0.00% | 33.33% | 50.00% | 16.67% | Non-Coding |
| 28. | NW_001884682 | TGCAAA | 3 | 751431 | 751449 | 19 | 50.00% | 16.67% | 16.67% | 16.67% | Non-Coding |
| 29. | NW_001884682 | CAGAAA | 3 | 774594 | 774611 | 18 | 66.67% | 0.00% | 16.67% | 16.67% | Non-Coding |
| 30. | NW_001884682 | TTAATA | 3 | 929026 | 929044 | 19 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001884682 | AAGACT | 3 | 984996 | 985012 | 17 | 50.00% | 16.67% | 16.67% | 16.67% | Non-Coding |
| 32. | NW_001884682 | GCCATG | 3 | 989735 | 989752 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 169785809 |
| 33. | NW_001884682 | GTGCCA | 3 | 989781 | 989798 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 169785809 |
| 34. | NW_001884682 | ACCTTC | 3 | 991080 | 991098 | 19 | 16.67% | 33.33% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001884682 | ATGGTC | 3 | 993593 | 993610 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 317158875 |
| 36. | NW_001884682 | ACCAAA | 3 | 1003566 | 1003582 | 17 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001884682 | AAAGAA | 4 | 1110459 | 1110482 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | 169785891 |
| 38. | NW_001884682 | CAACTA | 5 | 1194382 | 1194410 | 29 | 50.00% | 16.67% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001884682 | TTCACA | 3 | 1205907 | 1205925 | 19 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001884682 | GCGGGG | 3 | 1242961 | 1242978 | 18 | 0.00% | 0.00% | 83.33% | 16.67% | 169785979 |
| 41. | NW_001884682 | ACCTCA | 3 | 1290715 | 1290732 | 18 | 33.33% | 16.67% | 0.00% | 50.00% | Non-Coding |
| 42. | NW_001884682 | CTTTTT | 3 | 1303007 | 1303024 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 43. | NW_001884682 | ACCAAT | 3 | 1304395 | 1304413 | 19 | 50.00% | 16.67% | 0.00% | 33.33% | 169786019 |
| 44. | NW_001884682 | CGGATT | 3 | 1318064 | 1318081 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 169786027 |
| 45. | NW_001884682 | CTCTAT | 3 | 1329941 | 1329958 | 18 | 16.67% | 50.00% | 0.00% | 33.33% | Non-Coding |
| 46. | NW_001884682 | CCCAAA | 3 | 1331381 | 1331399 | 19 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 47. | NW_001884682 | AAAACA | 3 | 1345659 | 1345677 | 19 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |
| 48. | NW_001884682 | TTCTAC | 3 | 1346194 | 1346211 | 18 | 16.67% | 50.00% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001884682 | AAATAA | 4 | 1381753 | 1381776 | 24 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001884682 | GAGGGA | 3 | 1403499 | 1403516 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 51. | NW_001884682 | GTTGAA | 3 | 1420874 | 1420891 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 52. | NW_001884682 | GCCGAG | 3 | 1432408 | 1432426 | 19 | 16.67% | 0.00% | 50.00% | 33.33% | Non-Coding |
| 53. | NW_001884682 | AAAACG | 3 | 1445299 | 1445317 | 19 | 66.67% | 0.00% | 16.67% | 16.67% | Non-Coding |
| 54. | NW_001884682 | TAAAGA | 3 | 1458044 | 1458061 | 18 | 66.67% | 16.67% | 16.67% | 0.00% | 317159081 |
| 55. | NW_001884682 | TCCGAG | 3 | 1601449 | 1601466 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 317159142 |
| 56. | NW_001884682 | GTGGTA | 3 | 1645407 | 1645424 | 18 | 16.67% | 33.33% | 50.00% | 0.00% | Non-Coding |
| 57. | NW_001884682 | GCTGGA | 4 | 1651613 | 1651636 | 24 | 16.67% | 16.67% | 50.00% | 16.67% | Non-Coding |
| 58. | NW_001884682 | GCCTCA | 3 | 1663657 | 1663673 | 17 | 16.67% | 16.67% | 16.67% | 50.00% | Non-Coding |
| 59. | NW_001884682 | TCAAAT | 3 | 1667145 | 1667163 | 19 | 50.00% | 33.33% | 0.00% | 16.67% | Non-Coding |
| 60. | NW_001884682 | GGTTGA | 3 | 1701946 | 1701963 | 18 | 16.67% | 33.33% | 50.00% | 0.00% | 317159190 |
| 61. | NW_001884682 | GAAAAA | 3 | 1702161 | 1702178 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 62. | NW_001884682 | CGCTCG | 3 | 1757269 | 1757286 | 18 | 0.00% | 16.67% | 33.33% | 50.00% | 317159212 |
| 63. | NW_001884682 | TTTTAT | 6 | 1783323 | 1783358 | 36 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 64. | NW_001884682 | GAAAAA | 3 | 1821882 | 1821900 | 19 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 65. | NW_001884682 | TTTTTA | 4 | 1855728 | 1855750 | 23 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001884682 | CTTTTT | 3 | 1931375 | 1931393 | 19 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 67. | NW_001884682 | TGCACC | 3 | 1934755 | 1934773 | 19 | 16.67% | 16.67% | 16.67% | 50.00% | Non-Coding |
| 68. | NW_001884682 | CGCAAT | 3 | 1934953 | 1934976 | 24 | 33.33% | 16.67% | 16.67% | 33.33% | Non-Coding |
| 69. | NW_001884682 | ATTGGT | 3 | 1944724 | 1944742 | 19 | 16.67% | 50.00% | 33.33% | 0.00% | Non-Coding |
| 70. | NW_001884682 | GAGTGG | 3 | 1995416 | 1995433 | 18 | 16.67% | 16.67% | 66.67% | 0.00% | 317159326 |
| 71. | NW_001884682 | TTATTC | 3 | 1995550 | 1995567 | 18 | 16.67% | 66.67% | 0.00% | 16.67% | Non-Coding |
| 72. | NW_001884682 | TTTTCT | 3 | 2019457 | 2019475 | 19 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |