List of
Perfect Tri
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884681 | AAT | 4 | 255 | 266 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001884681 | TGA | 4 | 33730 | 33741 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 169784340 |
| 3. | NW_001884681 | GAT | 4 | 106464 | 106475 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 169784378 |
| 4. | NW_001884681 | AGA | 5 | 109153 | 109167 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001884681 | CTT | 5 | 136409 | 136423 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 169784400 |
| 6. | NW_001884681 | GAA | 6 | 156025 | 156042 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001884681 | GTT | 4 | 162282 | 162293 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 317157931 |
| 8. | NW_001884681 | GAA | 4 | 171376 | 171387 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 317157938 |
| 9. | NW_001884681 | GCT | 4 | 177126 | 177137 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317157942 |
| 10. | NW_001884681 | CTT | 4 | 192103 | 192114 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317157950 |
| 11. | NW_001884681 | GAT | 4 | 194735 | 194746 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 317157952 |
| 12. | NW_001884681 | ACT | 5 | 214846 | 214860 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 13. | NW_001884681 | TGG | 4 | 215480 | 215491 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 169784448 |
| 14. | NW_001884681 | ATA | 4 | 229443 | 229454 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001884681 | GGC | 4 | 243221 | 243232 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 169784466 |
| 16. | NW_001884681 | TCA | 4 | 301368 | 301379 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317158408 |
| 17. | NW_001884681 | GCT | 4 | 330928 | 330939 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317158006 |
| 18. | NW_001884681 | GAC | 4 | 339255 | 339266 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 317158412 |
| 19. | NW_001884681 | TGC | 4 | 448163 | 448174 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317158047 |
| 20. | NW_001884681 | GAA | 4 | 468244 | 468255 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 21. | NW_001884681 | TGA | 4 | 516773 | 516784 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 317158072 |
| 22. | NW_001884681 | CGC | 4 | 540436 | 540447 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317158447 |
| 23. | NW_001884681 | GAA | 4 | 564974 | 564985 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 317158085 |
| 24. | NW_001884681 | ACT | 4 | 567485 | 567496 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317158085 |
| 25. | NW_001884681 | CTC | 4 | 597185 | 597196 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317158097 |
| 26. | NW_001884681 | CCA | 4 | 665895 | 665906 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001884681 | AAT | 4 | 759661 | 759672 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 28. | NW_001884681 | TCA | 4 | 810076 | 810087 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317158488 |
| 29. | NW_001884681 | CTA | 5 | 818998 | 819012 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001884681 | ATA | 5 | 848800 | 848814 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001884681 | CTC | 5 | 873268 | 873282 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 32. | NW_001884681 | GAA | 5 | 876323 | 876337 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001884681 | TAG | 34 | 890896 | 890997 | 102 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 34. | NW_001884681 | GTA | 4 | 895930 | 895941 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 169784914 |
| 35. | NW_001884681 | GAA | 4 | 895942 | 895953 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 169784914 |
| 36. | NW_001884681 | GGA | 4 | 896330 | 896341 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 169784914 |
| 37. | NW_001884681 | TTC | 4 | 899398 | 899409 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317158221 |
| 38. | NW_001884681 | GTC | 4 | 902717 | 902728 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317158221 |
| 39. | NW_001884681 | CGG | 4 | 908117 | 908128 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 169784918 |
| 40. | NW_001884681 | AGC | 4 | 965695 | 965706 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 317158245 |
| 41. | NW_001884681 | TCT | 4 | 993891 | 993902 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317158255 |
| 42. | NW_001884681 | ATT | 4 | 1025585 | 1025596 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001884681 | ACA | 4 | 1084421 | 1084432 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 317158293 |
| 44. | NW_001884681 | GTC | 4 | 1099379 | 1099390 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 45. | NW_001884681 | GCC | 5 | 1256652 | 1256666 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 46. | NW_001884681 | TGG | 4 | 1259936 | 1259947 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317158388 |
| 47. | NW_001884681 | GCG | 4 | 1278527 | 1278538 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 317158530 |