List of
Perfect Tetra
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884681 | TAAT | 3 | 965 | 976 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001884681 | TAAA | 4 | 3343 | 3358 | 16 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001884681 | GAAT | 3 | 3463 | 3474 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 4. | NW_001884681 | CAGG | 3 | 3529 | 3540 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 5. | NW_001884681 | TATT | 3 | 4260 | 4271 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001884681 | ATTA | 3 | 4750 | 4761 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001884681 | TAAA | 3 | 4932 | 4943 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001884681 | TAGA | 3 | 4950 | 4961 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 9. | NW_001884681 | GTTA | 7 | 5171 | 5198 | 28 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 10. | NW_001884681 | TCTT | 3 | 21545 | 21556 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 11. | NW_001884681 | GTAC | 3 | 56564 | 56575 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001884681 | GAAA | 3 | 76280 | 76291 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 13. | NW_001884681 | AAAG | 3 | 83688 | 83699 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 14. | NW_001884681 | CTTT | 3 | 96877 | 96888 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 15. | NW_001884681 | CAAA | 3 | 97006 | 97017 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 16. | NW_001884681 | AATG | 3 | 107899 | 107910 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 17. | NW_001884681 | GAAA | 5 | 157899 | 157918 | 20 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 18. | NW_001884681 | CTAT | 3 | 173333 | 173344 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 19. | NW_001884681 | TCCT | 5 | 179226 | 179245 | 20 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 20. | NW_001884681 | CACT | 3 | 191041 | 191052 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001884681 | AGAA | 3 | 193253 | 193264 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 22. | NW_001884681 | TACC | 3 | 197243 | 197254 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 23. | NW_001884681 | TTTC | 3 | 199896 | 199907 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 317157954 |
| 24. | NW_001884681 | ATGG | 3 | 232685 | 232696 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001884681 | AAAC | 3 | 259302 | 259313 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 26. | NW_001884681 | TTCA | 3 | 279258 | 279269 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 27. | NW_001884681 | TATC | 3 | 315720 | 315731 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 28. | NW_001884681 | GCCT | 3 | 330227 | 330238 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 317158006 |
| 29. | NW_001884681 | TTTC | 3 | 415425 | 415436 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 317158417 |
| 30. | NW_001884681 | GAAA | 3 | 479758 | 479769 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 317158425 |
| 31. | NW_001884681 | CTGC | 3 | 493169 | 493180 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 317158062 |
| 32. | NW_001884681 | TACA | 3 | 496040 | 496051 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 33. | NW_001884681 | TGTT | 3 | 540964 | 540975 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 34. | NW_001884681 | TACA | 3 | 593416 | 593427 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NW_001884681 | TAAT | 3 | 644602 | 644613 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001884681 | GCCA | 3 | 690658 | 690669 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 317158474 |
| 37. | NW_001884681 | AATC | 3 | 716064 | 716075 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 38. | NW_001884681 | TCTA | 3 | 721022 | 721033 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 39. | NW_001884681 | ATTC | 3 | 774795 | 774806 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 317158168 |
| 40. | NW_001884681 | ATGG | 3 | 814998 | 815009 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 317158492 |
| 41. | NW_001884681 | CCTT | 3 | 818979 | 818990 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 42. | NW_001884681 | CGAC | 3 | 820980 | 820991 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 43. | NW_001884681 | AAAC | 3 | 903109 | 903120 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 44. | NW_001884681 | CAGC | 3 | 914467 | 914478 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 45. | NW_001884681 | TAAA | 3 | 914948 | 914959 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 46. | NW_001884681 | ATGG | 3 | 952281 | 952292 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 47. | NW_001884681 | TGTC | 3 | 993319 | 993330 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | 317158255 |
| 48. | NW_001884681 | GAAA | 3 | 1007586 | 1007597 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 49. | NW_001884681 | GAAA | 4 | 1019149 | 1019164 | 16 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 50. | NW_001884681 | AGAA | 3 | 1041078 | 1041089 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 51. | NW_001884681 | TCCA | 3 | 1093983 | 1093994 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 169785056 |
| 52. | NW_001884681 | TTGG | 3 | 1104266 | 1104277 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 53. | NW_001884681 | GAAT | 5 | 1224867 | 1224886 | 20 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 54. | NW_001884681 | CGGG | 3 | 1249984 | 1249995 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 55. | NW_001884681 | AGTC | 3 | 1254862 | 1254873 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 317158524 |
| 56. | NW_001884681 | AGAT | 3 | 1272501 | 1272512 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 57. | NW_001884681 | CAAA | 3 | 1277997 | 1278008 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |