List of
Imperfect Penta
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884681 | GTAAT | 3 | 49795 | 49809 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 317157892 |
| 2. | NW_001884681 | AGAAA | 5 | 52907 | 52931 | 25 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 3. | NW_001884681 | TTTTC | 3 | 56945 | 56958 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 4. | NW_001884681 | TTTTC | 5 | 57821 | 57845 | 25 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 5. | NW_001884681 | AAAAT | 3 | 60105 | 60119 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001884681 | GAAAA | 3 | 64601 | 64615 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 317157898 |
| 7. | NW_001884681 | CTACA | 5 | 77134 | 77158 | 25 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 8. | NW_001884681 | AAAAG | 3 | 83678 | 83691 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 9. | NW_001884681 | AAAGA | 3 | 83692 | 83706 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 10. | NW_001884681 | TTCTT | 3 | 87931 | 87945 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 11. | NW_001884681 | AGTCA | 4 | 107854 | 107872 | 19 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 12. | NW_001884681 | TATTT | 4 | 108674 | 108693 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 13. | NW_001884681 | AAAGA | 5 | 109118 | 109141 | 24 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 14. | NW_001884681 | CAAAA | 3 | 125116 | 125130 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 15. | NW_001884681 | TATGT | 3 | 134378 | 134391 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 16. | NW_001884681 | AAAAG | 3 | 137986 | 137999 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 17. | NW_001884681 | AGGAA | 3 | 138103 | 138116 | 14 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 18. | NW_001884681 | TTCTT | 4 | 149130 | 149149 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 19. | NW_001884681 | TAGAT | 3 | 149419 | 149432 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 20. | NW_001884681 | TTTAT | 4 | 150581 | 150600 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001884681 | TCGGC | 3 | 151954 | 151969 | 16 | 0.00% | 20.00% | 40.00% | 40.00% | 169784406 |
| 22. | NW_001884681 | ACAAA | 3 | 159229 | 159243 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | 317157931 |
| 23. | NW_001884681 | TTTTC | 3 | 224503 | 224517 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 24. | NW_001884681 | TGTGG | 3 | 232719 | 232732 | 14 | 0.00% | 40.00% | 60.00% | 0.00% | Non-Coding |
| 25. | NW_001884681 | AGGCG | 3 | 233758 | 233773 | 16 | 20.00% | 0.00% | 60.00% | 20.00% | 169784458 |
| 26. | NW_001884681 | TTCTC | 4 | 249299 | 249318 | 20 | 0.00% | 60.00% | 0.00% | 40.00% | 317157977 |
| 27. | NW_001884681 | GATCC | 3 | 264711 | 264725 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 28. | NW_001884681 | TTCTT | 3 | 280419 | 280433 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 29. | NW_001884681 | AAAAG | 3 | 282679 | 282692 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | 317157991 |
| 30. | NW_001884681 | AAGCA | 3 | 300132 | 300145 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | 317158406 |
| 31. | NW_001884681 | GTCTG | 3 | 361123 | 361136 | 14 | 0.00% | 40.00% | 40.00% | 20.00% | 169784544 |
| 32. | NW_001884681 | AATCC | 4 | 384221 | 384240 | 20 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 33. | NW_001884681 | CATCT | 3 | 403637 | 403651 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 34. | NW_001884681 | GCAGC | 3 | 404907 | 404921 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | 169784576 |
| 35. | NW_001884681 | GCCAA | 3 | 429373 | 429387 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | 317158419 |
| 36. | NW_001884681 | CTTGA | 3 | 446951 | 446964 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | 317158047 |
| 37. | NW_001884681 | ATCTC | 3 | 477309 | 477322 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | 317158425 |
| 38. | NW_001884681 | GGTTT | 3 | 496741 | 496756 | 16 | 0.00% | 60.00% | 40.00% | 0.00% | 317158064 |
| 39. | NW_001884681 | GGCCT | 3 | 550276 | 550289 | 14 | 0.00% | 20.00% | 40.00% | 40.00% | 169784688 |
| 40. | NW_001884681 | AAGCG | 3 | 567183 | 567196 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | 317158085 |
| 41. | NW_001884681 | TCAAG | 3 | 629128 | 629141 | 14 | 40.00% | 20.00% | 20.00% | 20.00% | 317158107 |
| 42. | NW_001884681 | GTACT | 3 | 688760 | 688773 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 43. | NW_001884681 | CCAGA | 3 | 709213 | 709226 | 14 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 44. | NW_001884681 | CAGCC | 3 | 721213 | 721227 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 45. | NW_001884681 | GTCTC | 3 | 814417 | 814431 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | 317158492 |
| 46. | NW_001884681 | TATTT | 4 | 836262 | 836281 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001884681 | CAAAC | 3 | 844406 | 844420 | 15 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 48. | NW_001884681 | TCGAG | 3 | 858486 | 858499 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 169784890 |
| 49. | NW_001884681 | CCAAT | 3 | 891326 | 891339 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 50. | NW_001884681 | AGTGG | 3 | 892079 | 892092 | 14 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 51. | NW_001884681 | CTTGG | 3 | 897942 | 897955 | 14 | 0.00% | 40.00% | 40.00% | 20.00% | 317158221 |
| 52. | NW_001884681 | CAATA | 3 | 904513 | 904527 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 53. | NW_001884681 | TGAAT | 3 | 907153 | 907167 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 169784918 |
| 54. | NW_001884681 | CTTTT | 5 | 919691 | 919716 | 26 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 55. | NW_001884681 | CTGCA | 3 | 926803 | 926817 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 317158494 |
| 56. | NW_001884681 | ATGCA | 4 | 950955 | 950975 | 21 | 40.00% | 20.00% | 20.00% | 20.00% | 317158237 |
| 57. | NW_001884681 | GCTGG | 3 | 963043 | 963056 | 14 | 0.00% | 20.00% | 60.00% | 20.00% | 169784948 |
| 58. | NW_001884681 | TGGAT | 3 | 964889 | 964902 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 59. | NW_001884681 | CAGGG | 3 | 977823 | 977838 | 16 | 20.00% | 0.00% | 60.00% | 20.00% | 317158500 |
| 60. | NW_001884681 | ATGGC | 3 | 983456 | 983469 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 317158504 |
| 61. | NW_001884681 | ATTTT | 3 | 987325 | 987338 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001884681 | TTGTG | 3 | 990890 | 990903 | 14 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 63. | NW_001884681 | AAGAA | 3 | 1019169 | 1019183 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 64. | NW_001884681 | TTTTC | 3 | 1028785 | 1028799 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 65. | NW_001884681 | TTTTG | 3 | 1048778 | 1048791 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 66. | NW_001884681 | ACAAG | 4 | 1117352 | 1117371 | 20 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 67. | NW_001884681 | GAAAA | 5 | 1142342 | 1142366 | 25 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 68. | NW_001884681 | ATCTA | 4 | 1156509 | 1156528 | 20 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 69. | NW_001884681 | TTTTC | 4 | 1180951 | 1180969 | 19 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 70. | NW_001884681 | TTTAA | 3 | 1188125 | 1188139 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 71. | NW_001884681 | GCATC | 3 | 1201158 | 1201171 | 14 | 20.00% | 20.00% | 20.00% | 40.00% | 317158357 |
| 72. | NW_001884681 | CATGA | 3 | 1218856 | 1218869 | 14 | 40.00% | 20.00% | 20.00% | 20.00% | 317158361 |
| 73. | NW_001884681 | TCCTC | 3 | 1223996 | 1224009 | 14 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 74. | NW_001884681 | ATCAT | 3 | 1268887 | 1268901 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |