List of
Imperfect Hexa
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884681 | ATTTTT | 4 | 641 | 663 | 23 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001884681 | AAAGAA | 3 | 6429 | 6447 | 19 | 83.33% | 0.00% | 16.67% | 0.00% | 317157866 |
| 3. | NW_001884681 | CCCCTC | 3 | 6893 | 6910 | 18 | 0.00% | 16.67% | 0.00% | 83.33% | 317157868 |
| 4. | NW_001884681 | ATAAAG | 3 | 53054 | 53072 | 19 | 66.67% | 16.67% | 16.67% | 0.00% | Non-Coding |
| 5. | NW_001884681 | CATTTC | 3 | 76610 | 76627 | 18 | 16.67% | 50.00% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001884681 | GGCGTT | 4 | 87230 | 87253 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | Non-Coding |
| 7. | NW_001884681 | TTCTTT | 3 | 96883 | 96900 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 8. | NW_001884681 | TTTCGT | 3 | 103140 | 103157 | 18 | 0.00% | 66.67% | 16.67% | 16.67% | 169784376 |
| 9. | NW_001884681 | GAGCCA | 3 | 109660 | 109677 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 317157913 |
| 10. | NW_001884681 | CTTCGT | 3 | 142412 | 142429 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 317157926 |
| 11. | NW_001884681 | ATTTTA | 3 | 149892 | 149910 | 19 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001884681 | CCCTTT | 3 | 172438 | 172456 | 19 | 0.00% | 50.00% | 0.00% | 50.00% | 317157938 |
| 13. | NW_001884681 | AACCCA | 3 | 173425 | 173443 | 19 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 14. | NW_001884681 | TTTTAA | 3 | 179913 | 179930 | 18 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001884681 | AGACCT | 3 | 217364 | 217381 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | 317157966 |
| 16. | NW_001884681 | TCCTCA | 3 | 313124 | 313141 | 18 | 16.67% | 33.33% | 0.00% | 50.00% | 317158000 |
| 17. | NW_001884681 | AAACCC | 3 | 361570 | 361588 | 19 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 18. | NW_001884681 | AACGAA | 4 | 403311 | 403334 | 24 | 66.67% | 0.00% | 16.67% | 16.67% | Non-Coding |
| 19. | NW_001884681 | GCTGGG | 3 | 410668 | 410685 | 18 | 0.00% | 16.67% | 66.67% | 16.67% | Non-Coding |
| 20. | NW_001884681 | CCGCAG | 3 | 536574 | 536591 | 18 | 16.67% | 0.00% | 33.33% | 50.00% | 317158077 |
| 21. | NW_001884681 | TCGGGT | 4 | 556195 | 556218 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | Non-Coding |
| 22. | NW_001884681 | GTGGCA | 3 | 582915 | 582931 | 17 | 16.67% | 16.67% | 50.00% | 16.67% | 317158093 |
| 23. | NW_001884681 | GTGGGA | 3 | 610419 | 610437 | 19 | 16.67% | 16.67% | 66.67% | 0.00% | 317158099 |
| 24. | NW_001884681 | AGAAAA | 3 | 622896 | 622913 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 25. | NW_001884681 | GGCCAA | 3 | 671779 | 671797 | 19 | 33.33% | 0.00% | 33.33% | 33.33% | 317158464 |
| 26. | NW_001884681 | CTGACT | 3 | 697763 | 697780 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 317158131 |
| 27. | NW_001884681 | TTAGCT | 3 | 704194 | 704211 | 18 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 28. | NW_001884681 | GATAAG | 3 | 710361 | 710378 | 18 | 50.00% | 16.67% | 33.33% | 0.00% | 317158138 |
| 29. | NW_001884681 | GAGAAA | 3 | 711541 | 711558 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | 317158138 |
| 30. | NW_001884681 | GAACAG | 3 | 802013 | 802030 | 18 | 50.00% | 0.00% | 33.33% | 16.67% | Non-Coding |
| 31. | NW_001884681 | ATAAAT | 3 | 819118 | 819136 | 19 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001884681 | AGCCTG | 3 | 821950 | 821967 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 317158188 |
| 33. | NW_001884681 | AGAAAA | 3 | 831744 | 831761 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | 317158192 |
| 34. | NW_001884681 | TGTTGC | 3 | 831968 | 831985 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 317158192 |
| 35. | NW_001884681 | GGAACG | 3 | 838591 | 838608 | 18 | 33.33% | 0.00% | 50.00% | 16.67% | Non-Coding |
| 36. | NW_001884681 | GTGCTG | 3 | 840048 | 840065 | 18 | 0.00% | 33.33% | 50.00% | 16.67% | 317158196 |
| 37. | NW_001884681 | GCAGAA | 4 | 840129 | 840152 | 24 | 50.00% | 0.00% | 33.33% | 16.67% | 317158196 |
| 38. | NW_001884681 | GTAGAA | 3 | 840153 | 840170 | 18 | 50.00% | 16.67% | 33.33% | 0.00% | 317158196 |
| 39. | NW_001884681 | TTTCTT | 4 | 847739 | 847763 | 25 | 0.00% | 83.33% | 0.00% | 16.67% | 169784882 |
| 40. | NW_001884681 | TGTTTT | 3 | 857383 | 857400 | 18 | 0.00% | 83.33% | 16.67% | 0.00% | Non-Coding |
| 41. | NW_001884681 | AACCCC | 3 | 895266 | 895283 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 42. | NW_001884681 | CTTGGG | 4 | 898557 | 898580 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | 317158221 |
| 43. | NW_001884681 | TAGGTT | 3 | 956429 | 956446 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001884681 | AATAAA | 3 | 995549 | 995567 | 19 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 45. | NW_001884681 | CTTCGG | 3 | 995650 | 995667 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 169784974 |
| 46. | NW_001884681 | TTCTCT | 3 | 1011819 | 1011836 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 47. | NW_001884681 | CGTGGT | 3 | 1036189 | 1036206 | 18 | 0.00% | 33.33% | 50.00% | 16.67% | 317158276 |
| 48. | NW_001884681 | GTGGGA | 4 | 1036208 | 1036231 | 24 | 16.67% | 16.67% | 66.67% | 0.00% | 317158276 |
| 49. | NW_001884681 | CGTGAT | 3 | 1036315 | 1036332 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 317158276 |
| 50. | NW_001884681 | TGGCTG | 6 | 1036344 | 1036379 | 36 | 0.00% | 33.33% | 50.00% | 16.67% | 317158276 |
| 51. | NW_001884681 | GTGATG | 3 | 1037321 | 1037337 | 17 | 16.67% | 33.33% | 50.00% | 0.00% | 317158276 |
| 52. | NW_001884681 | CACTTT | 3 | 1084825 | 1084842 | 18 | 16.67% | 50.00% | 0.00% | 33.33% | Non-Coding |
| 53. | NW_001884681 | AAAATA | 3 | 1146768 | 1146786 | 19 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001884681 | TCTTTT | 4 | 1178937 | 1178960 | 24 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 55. | NW_001884681 | AATACC | 4 | 1186188 | 1186211 | 24 | 50.00% | 16.67% | 0.00% | 33.33% | 169785122 |
| 56. | NW_001884681 | CCCCAC | 3 | 1260083 | 1260100 | 18 | 16.67% | 0.00% | 0.00% | 83.33% | Non-Coding |